Campylobacter jejuni R12 |
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Putative Campylobacter jejuni R12 RM systems
Ref: Heikema,A.P. et al. unpublished
REBASE ref # 31907
Complete sequence: 1,664,509 bp
GenBank #: CP071576
REBASE acronym: CjeR12
Org_num: 47053
All begin J3Q17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3850 | molecular chaperone DnaK | |||
| 3855 | M | M.Csp93260ORF3690P (100% identity) | AGTNNNNNNRTTG | M.CjeR12ORF3855P |
| 3860 | S | S.Csp93260ORF3690P (100% identity) | AGTNNNNNNRTTG | S.CjeR12ORF3855P |
| 3865 | DUF4145 domain-containing protein | |||
| 3870 | DUF4917 family protein | |||
| 3875 | R | Csp93260ORF3690P (100% identity) | AGTNNNNNNRTTG | CjeR12ORF3855P |
| 3880 | MBL fold metallo-hydrolase | |||
| 7610 | NAD(P)-dependent alcohol dehydrogenase | |||
| 7615 | R | CjeGB28ORF7355P (99% identity) | CRTANNNNNNNNTAYC | CjeR12ORF7635P |
| 7620 | DUF262 domain-containing protein | |||
| 7625 | S | S.CjeR72ORF7470P (100% identity) | CRTANNNNNNNNTAYC | S.CjeR12ORF7635P |
| 7630 | Fic family protein | |||
| 7635 | M | M.Csp93241ORF7610P (100% identity) | CRTANNNNNNNNTAYC | M.CjeR12ORF7635P |
| 7640 | carboxymuconolactone decarboxylase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 195 | gamma-glutamyltransferase | |||
| 200 | RM | CjeHBORF48P (87% identity) | CjeR12ORF200P | |
| 205 | pentapeptide repeat-containing protein | |||
| 1010 | translation initiation factor IF-3 | |||
| 1015 | M | M.Csp93259ORF1035P (100% identity) | RAATTY | M.CjeR12ORF1015P |
| 1020 | autotransporter serine protease VvfC | |||
| 2335 | 279 aa hypothetical protein | |||
| 2340 | M | M.Csp6461ORF6515P (100% identity) | M.CjeR12ORF2340P | |
| 2345 | 111 aa hypothetical protein | |||
| 3690 | M48 family metallopeptidase | |||
| 3695 | M | M.CjeR73ORF3440P (100% identity) | M.CjeR12ORF3695P | |
| 3700 | 57 aa hypothetical protein | |||
| 8530 | Gfo/Idh/MocA family oxidoreductase | |||
| 8535 | M | M1.CjeR73ORF8285P (100% identity) | CATG | M1.CjeR12ORF8535P |
| 8540 | DUF1016 family protein | |||
| 8545 | 73 aa hypothetical protein | |||
| 8550 | R | CjeR73ORF8285P (100% identity) | CjeR12ORF8535P | |
| 8555 | 47 aa hypothetical protein | |||
| 8560 | M | M2.CjeR73ORF8285P (100% identity) | M2.CjeR12ORF8535P | |
| 8565 | NADPH-dependent 7-cyano-7-deazaguanine reductase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 695 | ribosome maturation factor RimP | |||
| 700 | R | Csp93238McrBP (100% identity) | CjeR12McrBP | |
| 705 | R | Csp9McrCP (100% identity) | CjeR12McrCP | |
| 710 | metal ABC transporter permease | |||