Glaesserella parasuis GHP1808 |
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Putative Glaesserella parasuis GHP1808 RM systems
Ref: Hu,G. and Sun,H. unpublished
REBASE ref # 30439
Complete sequence: 2,317,899 bp
GenBank #: CP071490
REBASE acronym: Gpa1808
Org_num: 47790
All begin J1G53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4855 | 3-phosphoserine/phosphohydroxythreonine | |||
| 4860 | M | M.Gpa412ORF7440P (99% identity) | M.Gpa1808ORF4860P | |
| 4865 | S | S.Gpa1818ORF5815P (64% identity) | S.Gpa1808ORF4860P | |
| 4870 | R | Hpa33ORF7204P (99% identity) | Gpa1808ORF4860P | |
| 4875 | histidinol-phosphate transaminase | |||
| 10960 | 101 aa hypothetical protein | |||
| 10965 | R | GpaH80ORF9625P (99% identity) | Gpa1808ORF10990P | |
| 10970 | 145 aa hypothetical protein | |||
| 10975 | DUF1829 domain-containing protein | |||
| 10980 | S | S.Hpa906ORF11530P (66% identity) | S.Gpa1808ORF10990P | |
| 10985 | AAA family ATPase | |||
| 10990 | M | M.HpaSH03ORF10045P (99% identity) | M.Gpa1808ORF10990P | |
| 10995 | spermidine/putrescine ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1030 | 56 aa hypothetical protein | |||
| 1035 | R | HpaSHORF1983P (99% identity) | Gpa1808ORF1040P | |
| 1040 | M | M.Gpa1818ORF1230P (100% identity) | M.Gpa1808ORF1040P | |
| 1045 | valine--tRNA ligase | |||
| 1125 | 768 aa hypothetical protein | |||
| 1130 | M | M.Hpa33ORF8359P (100% identity) | M.Gpa1808ORF1130P | |
| 1135 | IS1595 family transposase | |||
| 2260 | 2-hydroxyacid dehydrogenase | |||
| 2265 | R | GpaHPS1ORF3120P (100% identity) | Gpa1808ORF2270P | |
| 2270 | M | M.HpaST41ORF8905P (100% identity) | M.Gpa1808ORF2270P | |
| 2275 | flavodoxin-dependent | |||
| 3065 | sodium-dependent transporter | |||
| 3070 | M | M.HpaST41ORF8035P (100% identity) | GATC | M.Gpa1808ORF3070P |
| 3075 | 3-dehydroquinate synthase | |||
| 4430 | chromosome partition protein MukE | |||
| 4435 | M | M.GpaHPS1ORF5345P (100% identity) | M.Gpa1808ORF4435P | |
| 4440 | 199 aa hypothetical protein | |||
| 6075 | recombination protein NinB | |||
| 6080 | M | M.Hpa174ORF859P (100% identity) | M.Gpa1808ORF6080P | |
| 6085 | holin | |||
| 6425 | AAA family ATPase | |||
| 6430 | M | M.HpaSHORF629P (100% identity) | M.Gpa1808ORF6430P | |
| 6435 | addiction module antidote protein | |||
| 7530 | peptide chain release factor N(5)-glutamine | |||
| 7535 | R | HpaSHORF791P (100% identity) | Gpa1808ORF7540P | |
| ??? | M | M.HpaSH03ORF2165P (98% identity) | M.Gpa1808ORF7540P | |
| 7545 | peptide chain release factor 1 | |||
| 8475 | aspartate-semialdehyde dehydrogenase | |||
| 8480 | M | HpaSHORF963P (99% identity) | M.Gpa1808ORF8480P | |
| 8485 | 103 aa hypothetical protein | |||
| 10745 | virulence RhuM family protein | |||
| 10750 | S | S.HpaSH03ORF10290P (32% identity) | S2.Gpa1808ORF10760P | |
| 10755 | S | S.HpaSHORF1761P (98% identity) | S1.Gpa1808ORF10760P | |
| 10760 | RM | HpaSHORF1761P (99% identity) | Gpa1808ORF10760P | |
| 10765 | DUF4143 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2445 | beta-ketoacyl-ACP synthase I | |||
| 2450 | R | Gpa1818ORF9895P (100% identity) | Gpa1808ORF2455P | |
| 2455 | M | M.Gpa70512ORF2495P (98% identity) | M.Gpa1808ORF2455P | |
| 2460 | DUF4391 domain-containing protein | |||
| 10250 | Fic family protein | |||
| 10255 | R | Hpa33ORFBP (100% identity) | Gpa1808ORF10260P | |
| 10260 | M | M2.Hpa33ORFBP (58% identity) | M.Gpa1808ORF10260P | |
| 10265 | ketol-acid reductoisomerase | |||