Glaesserella parasuis YHP1815 |
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Putative Glaesserella parasuis YHP1815 RM systems
Ref: Hu,G. and Sun,H. unpublished
REBASE ref # 30439
Complete sequence: 2,357,562 bp
GenBank #: CP071489
REBASE acronym: Gpa1815
Org_num: 47792
All begin J1G50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1215 | D-lactate dehydrogenase | |||
| 1220 | M | M.Hpa1401ORF6765P (100% identity) | M.Gpa1815ORF1220P | |
| 1225 | AAA family ATPase | |||
| 1230 | S | S.Gpa1818ORF10805P (51% identity) | S1.Gpa1815ORF1220P | |
| 1235 | S | S2.HpaSW140ORF1427P (100% identity) | S2.Gpa1815ORF1220P | |
| 1240 | DUF1829 domain-containing protein | |||
| 1245 | 145 aa hypothetical protein | |||
| 1250 | R | GpaHF57ORF9645P (100% identity) | Gpa1815ORF1220P | |
| 1255 | 87 aa hypothetical protein | |||
| 5275 | 3-phosphoserine/phosphohydroxythreonine | |||
| 5280 | M | M.GpaHF57ORF5595P (100% identity) | M.Gpa1815ORF5280P | |
| 5285 | S | S.GpaHF57ORF5595P (100% identity) | S.Gpa1815ORF5280P | |
| 5290 | R | Hpa174ORF186P (99% identity) | Gpa1815ORF5280P | |
| 5295 | histidinol-phosphate transaminase | |||
| 11160 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 11165 | S | S.HpaNNII (100% identity) | GTANNNNNNNCTTG | S.Gpa1815ORF11180P |
| 11170 | R | GpaHF57ORF11115P (100% identity) | GTANNNNNNNCTTG | Gpa1815ORF11180P |
| 11175 | DNA binding domain-containing protein | |||
| 11180 | M | M.HpaST41ORF7145P (100% identity) | GTANNNNNNNCTTG | M.Gpa1815ORF11180P |
| 11185 | 16S rRNA (guanine(527)-N(7))-methyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 965 | winged helix-turn-helix transcriptional | |||
| 970 | RM | HpaMNHORF1496P (100% identity) | Gpa1815ORF970P | |
| 975 | S | S.HpaMNHORF1496P (99% identity) | S.Gpa1815ORF970P | |
| 980 | virulence RhuM family protein | |||
| 3400 | helix-turn-helix transcriptional regulator | |||
| ??? | RM | M.GpaHPS7ORF3655P (97% identity) | Gpa1815ORF3405P | |
| 3425 | transposase | |||
| 6145 | Com family DNA-binding transcriptional | |||
| 6150 | M | M.GpaHF57ORF4725P (100% identity) | M.Gpa1815ORF6150P | |
| 6155 | 86 aa hypothetical protein | |||
| 7845 | 3-dehydroquinate synthase | |||
| 7850 | M | M.GpaHF57ORF3050P (100% identity) | GATC | M.Gpa1815ORF7850P |
| 7855 | sodium-dependent transporter | |||
| 9950 | 63 aa hypothetical protein | |||
| 9955 | M | M.HpaSHORF1954P (100% identity) | M.Gpa1815ORF9955P | |
| 9960 | DUF262 domain-containing protein | |||
| 9960 | DUF262 domain-containing protein | |||
| 9965 | S | S.GpaHF57ORF9925P (100% identity) | GAGNNNNRTAA | S.Gpa1815ORF9970P |
| 9970 | RM | GpaHF57ORF9925P (100% identity) | GAGNNNNRTAA | Gpa1815ORF9970P |
| 9975 | 174 aa hypothetical protein | |||
| 9995 | nitronate monooxygenase | |||
| 10000 | R | GpaHF57ORF9965P (100% identity) | Gpa1815ORF10005P | |
| 10005 | M | M.GpaHF57ORF9965P (100% identity) | M.Gpa1815ORF10005P | |
| 10010 | ATP-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 830 | Fic family protein | |||
| 835 | R | GpaHF57ORF830P (100% identity) | Gpa1815ORF840P | |
| 840 | M | M.GpaHF57ORF830P (100% identity) | M.Gpa1815ORF840P | |
| 845 | ketol-acid reductoisomerase | |||