Glaesserella parasuis YHP1818 |
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Putative Glaesserella parasuis YHP1818 RM systems
Ref: Hu,G. and Sun,H. unpublished
REBASE ref # 30439
| Sequence length: | GenBank #: | |
| Chromosome: | 2,289,620 bp | CP071487 |
| plasmid unnamed: | 24,230 bp | CP071488 |
REBASE acronym: Gpa1818
Org_num: 47793
All begin J1G47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5810 | IS110 family transposase | |||
| 5815 | M | M.HpaSHORF348P (96% identity) | M.Gpa1818ORF5815P | |
| 5820 | S | S.Gpa1808ORF4860P (64% identity) | S.Gpa1818ORF5815P | |
| 5825 | R | HpaSHORF348P (98% identity) | Gpa1818ORF5815P | |
| 5830 | histidinol-phosphate transaminase | |||
| 10780 | 71 aa hypothetical protein | |||
| 10785 | R | Hpa15995ORF1730P (99% identity) | Gpa1818ORF10805P | |
| 10790 | 145 aa hypothetical protein | |||
| 10795 | DUF1829 domain-containing protein | |||
| 10800 | S | S.Gpa1808ORF10990P (67% identity) | S.Gpa1818ORF10805P | |
| 10805 | M | M.HpaSW114ORF1565P (99% identity) | M.Gpa1818ORF10805P | |
| 10810 | spermidine/putrescine ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 185 | 86 aa hypothetical protein | |||
| 190 | M | M.Gpa70512ORF2815P (100% identity) | M.Gpa1818ORF190P | |
| 195 | enoyl-CoA hydratase | |||
| 1220 | 56 aa hypothetical protein | |||
| 1225 | R | HpaSHORF1983P (99% identity) | Gpa1818ORF1230P | |
| 1230 | M | M.Gpa1808ORF1040P (100% identity) | M.Gpa1818ORF1230P | |
| 1235 | valine--tRNA ligase | |||
| 5325 | enoyl-CoA hydratase | |||
| 5330 | M | M.Gpa70512ORF2815P (100% identity) | M.Gpa1818ORF5330P | |
| 5335 | 86 aa hypothetical protein | |||
| 5370 | chromosome partition protein MukE | |||
| 5375 | M | M.Gpa70512ORF4755P (100% identity) | M.Gpa1818ORF5375P | |
| 5380 | 199 aa hypothetical protein | |||
| 6895 | AAA family ATPase | |||
| 6900 | M | M.HpaSHORF629P (100% identity) | M.Gpa1818ORF6900P | |
| 6905 | addiction module antidote protein | |||
| 7335 | peptide chain release factor N(5)-glutamine | |||
| 7340 | R | HpaSHORF791P (100% identity) | Gpa1818ORF7345P | |
| ??? | M | M.HpaSH03ORF2165P (98% identity) | M.Gpa1818ORF7345P | |
| 7350 | peptide chain release factor 1 | |||
| 9410 | transposase | |||
| ??? | M | M.GpaH80ORF2180P (100% identity) | M.Gpa1818ORF9420P | |
| 9425 | aspartate-semialdehyde dehydrogenase | |||
| 9700 | 2-hydroxyacid dehydrogenase | |||
| 9705 | R | HpaST41ORF8905P (100% identity) | Gpa1818ORF9710P | |
| 9710 | M | M.HpaST41ORF8905P (100% identity) | M.Gpa1818ORF9710P | |
| 9715 | flavodoxin-dependent | |||
| 10505 | sodium-dependent transporter | |||
| 10510 | M | M.HpaSHDamP (100% identity) | GATC | M.Gpa1818ORF10510P |
| 10515 | 3-dehydroquinate synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3325 | Fic family protein | |||
| 3330 | R | Hpa15995ORF1371P (99% identity) | Gpa1818ORF3335P | |
| 3335 | M | M.GpaH80ORF8730BP (59% identity) | M.Gpa1818ORF3335P | |
| 3340 | ketol-acid reductoisomerase | |||
| 9890 | beta-ketoacyl-ACP synthase I | |||
| 9895 | R | Gpa1808ORF2455P (100% identity) | Gpa1818ORF9895P | |
| 9900 | 103 aa hypothetical protein | |||
| plasmid unnamed | ||||
| 11610 | LysR family transcriptional regulator | |||
| 11615 | R | Hpa33ORF10578P (99% identity) | Gpa1818ORF11620P | |
| 11620 | M | M.HpaSHORF1827P (99% identity) | M.Gpa1818ORF11620P | |
| 11625 | ATP-binding protein | |||