Escherichia coli EcPF20 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli EcPF20 RM systems
Ref: Sharon,B.M. et al. unpublished
REBASE ref # 31828
| Sequence length: | GenBank #: | |
| Chromosome: | 4,828,326 bp | CP071441 |
| plasmid p2: | 88,572 bp | CP071443 |
REBASE acronym: EcoPF20
Org_num: 46575
All begin J1F34_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5105 | drug/metabolite exporter YedA | |||
| 5110 | V | V.SflN116DcmP (100% identity) | V.EcoPF20DcmP | |
| 5115 | M | M.SflN116DcmP (100% identity) | CCWGG | M.EcoPF20DcmP |
| 5120 | phosphohydrolase | |||
| 11735 | DNA-binding transcriptional regulator Fis | |||
| 11740 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoPF20ORF11740P |
| 11745 | DUF2556 family protein | |||
| 12290 | ribulose-phosphate 3-epimerase | |||
| 12295 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoPF20DamP |
| 12300 | cell division protein DamX | |||
| 17260 | IS21-like element ISEc12 family helper ATPase | |||
| 17265 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoPF20ORF17265P |
| 17270 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoPF20ORF17265P |
| 17275 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoPF20ORF17265P |
| 17280 | McrC family protein | |||
| 19335 | TrmB family transcriptional regulator | |||
| 19340 | M | M.Efe65411ORF2910P (100% identity) | M.EcoPF20ORF19340P | |
| 19345 | phage lysis protein EssD | |||
| 22570 | TraR/DksA family transcriptional regulator | |||
| 22575 | M | M.Eco4404ORFBP (98% identity) | GATC | M.EcoPF20ORF22575P |
| 22580 | replication endonuclease | |||
| plasmid p2 | ||||
| 24025 | 101 aa hypothetical protein | |||
| 24030 | M | M.SenBR027ORFEP (100% identity) | SAY | M.EcoPF20ORF24030P |
| 24035 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17275 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 17280 | R | EcosS9McrCP (100% identity) | EcoPF20McrCP | |
| 17285 | R | EcosS3McrBP (100% identity) | EcoPF20McrBP | |
| 17290 | IS66-like element ISEc23 family transposase | |||