Escherichia coli RIVM_C029494 |
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Putative Escherichia coli RIVM_C029494 RM systems
Ref: Hendrickx,A.P.A. et al. unpublished
REBASE ref # 31854
Complete sequence: 4,935,988 bp
GenBank #: CP068823
REBASE acronym: Eco29494
Org_num: 46783
All begin JNN66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 430 | MmcB family DNA repair protein | |||
| 435 | R | EcoCase6ORF480P (100% identity) | CAAYNNNNNCTGC | Eco29494ORF440P |
| 440 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.Eco29494ORF440P |
| 445 | S | S.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | S.Eco29494ORF440P |
| 450 | AAA family ATPase | |||
| 19725 | N-6 DNA methylase | |||
| 19730 | R | EcoTCM3e1ORF20315P (100% identity) | Eco29494ORF19740P | |
| 19735 | S | S.Sbo812ORFDP (97% identity) | S.Eco29494ORF19740P | |
| 19740 | M | M2.Sbo812ORFDP (99% identity) | M2.Eco29494ORF19740P | |
| 19745 | M | M1.Sbo812ORFDP (93% identity) | M1.Eco29494ORF19740P | |
| 19750 | toll/interleukin-1 receptor domain-containing | |||
| 19920 | transposase | |||
| 19925 | R | EcoSC054ORF4470P (100% identity) | Eco29494ORF19930P | |
| 19930 | M | M.EcosEC2ORF410P (100% identity) | M.Eco29494ORF19930P | |
| 19935 | S | S.EcosEC2ORF410P (100% identity) | S.Eco29494ORF19930P | |
| 19940 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2110 | cell division protein DamX | |||
| 2115 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco29494DamP |
| 2120 | ribulose-phosphate 3-epimerase | |||
| 2640 | DUF2556 family protein | |||
| 2645 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.Eco29494ORF2645P |
| 2650 | DNA-binding transcriptional regulator Fis | |||
| 13690 | drug/metabolite exporter YedA | |||
| 13695 | V | V.SflC32DcmP (74% identity) | V.Eco29494DcmP | |
| 13700 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.Eco29494DcmP |
| 13705 | phosphohydrolase | |||