Escherichia coli RIVM_C029951 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RIVM_C029951 RM systems
Ref: Hendrickx,A.P.A. et al. unpublished
REBASE ref # 31854
Complete sequence: 5,197,546 bp
GenBank #: CP068820
REBASE acronym: Eco29951
Org_num: 46784
All begin JNN41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11775 | restriction endonuclease | |||
| ??? | M | M.EcoSC054ORF4200P (100% identity) | GGYANNNNNGTNG | M.Eco29951ORF11780P |
| 11785 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.Eco29951ORF11780P |
| 11790 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | Eco29951ORF11780P |
| 11795 | endoribonuclease SymE | |||
| 16275 | MmcB family DNA repair protein | |||
| 16280 | R | EcoCase6ORF480P (100% identity) | CAAYNNNNNCTGC | Eco29951ORF16285P |
| 16285 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.Eco29951ORF16285P |
| 16290 | S | S.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | S.Eco29951ORF16285P |
| 16295 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1175 | phosphohydrolase | |||
| 1180 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.Eco29951DcmP |
| 1185 | V | V.SsoSE61DcmP (100% identity) | V.Eco29951DcmP | |
| 1190 | drug/metabolite exporter YedA | |||
| 1715 | PerC family transcriptional regulator | |||
| 1720 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco29951ORF1720P |
| 1725 | LexA family transcriptional regulator | |||
| 18145 | cell division protein DamX | |||
| 18150 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco29951DamP |
| 18155 | ribulose-phosphate 3-epimerase | |||
| 18680 | DUF2556 family protein | |||
| 18685 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco29951ORF18685P |
| 18690 | DNA-binding transcriptional regulator Fis | |||
| 20505 | integrase | |||
| 20510 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.Eco29951ORF20510P |
| 20515 | R | SflFF80ORF21000P (100% identity) | YGGCCR | Eco29951ORF20510P |
| 20520 | transposase | |||