Klebsiella pneumoniae IR5086 |
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Putative Klebsiella pneumoniae IR5086 RM systems
Ref: Wang,L. unpublished
REBASE ref # 29098
| Sequence length: | GenBank #: | |
| Chromosome: | 5,252,594 bp | CP061975 |
| plasmid unnamed1: | 24,514 bp | CP061976 |
| plasmid unnamed2: | 266,729 bp | CP061977 |
| plasmid unnamed4: | 95,882 bp | CP061979 |
REBASE acronym: Kpn5086
Org_num: 47939
All begin H4I67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22175 | 322 aa hypothetical protein | |||
| 22180 | R | Ksp4251ORF21690P (100% identity) | GAAYNNNNNNNCTGG | Kpn5086ORF22185P |
| 22185 | M | M.Ksp4251ORF21690P (100% identity) | GAAYNNNNNNNCTGG | M.Kpn5086ORF22185P |
| 22190 | S | S.Ksp4251ORF21690P (100% identity) | GAAYNNNNNNNCTGG | S.Kpn5086ORF22185P |
| 22195 | endoribonuclease SymE | |||
| 22520 | S | S.Ksp4251ORF22010P (100% identity) | CGANNNNNNNNTGCC | S.Kpn5086ORF22525P |
| 22525 | M | M.Ksp4251ORF22010P (100% identity) | CGANNNNNNNNTGCC | M.Kpn5086ORF22525P |
| 22530 | R | Kpnr99ORF22815P (100% identity) | CGANNNNNNNNTGCC | Kpn5086ORF22525P |
| 22535 | integrase arm-type DNA-binding domain-containing | |||
| plasmid unnamed2 | ||||
| 26965 | DUF262 domain-containing protein | |||
| 26970 | M | M.KquFF28ORF25680P (100% identity) | TCANNNNNNRTAYC | M.Kpn5086ORF26970P |
| 26975 | S | S.KpnyORFJP (100% identity) | TCANNNNNNRTAYC | S.Kpn5086ORF26970P |
| 26980 | AAA family ATPase | |||
| 25665 | R | KpnyORFJP (97% identity) | TCANNNNNNRTAYC | Kpn5086ORF26970P |
| 25670 | 157 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.KspC31DamP (100% identity) | GATC | M.Kpn5086DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 8920 | phosphohydrolase | |||
| ??? | M | M.KpnsBRORF3775P (99% identity) | CCWGG | M.Kpn5086ORF8925P |
| 8930 | very short patch repair endonuclease | |||
| ??? | dcm | |||
| 8930 | V | V.Ksp2N3ORFEP (75% identity) | V.Kpn5086DcmP | |
| 8935 | drug/metabolite exporter YedA | |||
| 19035 | regulator | |||
| 19040 | M | M2.Kpni392wORF2000P (100% identity) | M1.Kpn5086ORF19040P | |
| 19045 | M | M1.Kpni392wORF2000P (100% identity) | M2.Kpn5086ORF19040P | |
| 19050 | 72 aa hypothetical protein | |||
| 22405 | HNH endonuclease | |||
| 22410 | R | Ksp4251ORF21915P (100% identity) | Kpn5086ORF22410P | |
| 22415 | type VI secretion system tube protein Hcp | |||
| plasmid unnamed1 | ||||
| 25545 | IS1 family transposase | |||
| 25550 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.Kpn5086ORF25550P |
| 25555 | R | Ssp3CORF24390P (100% identity) | CCWGG | Kpn5086ORF25550P |
| 25560 | IS6-like element IS26 family transposase | |||
| plasmid unnamed2 | ||||
| 26350 | 168 aa hypothetical protein | |||
| 26355 | M | M.Sen20597ORF9240P (100% identity) | M.Kpn5086ORF26355P | |
| 26360 | 1126 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 27865 | 76 aa hypothetical protein | |||
| 27870 | M | M.SmaQC11ORF52800P (100% identity) | M.Kpn5086ORF27870P | |
| 27875 | 73 aa hypothetical protein | |||