Escherichia coli RIVM_C018249 |
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Putative Escherichia coli RIVM_C018249 RM systems
Ref: Hendrickx,A.P.A. et al. unpublished
REBASE ref # 31854
Complete sequence: 4,983,069 bp
GenBank #: CP068802
REBASE acronym: Eco18249
Org_num: 46763
All begin JNN40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5780 | transcription factor | |||
| 5785 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.Eco18249ORF5785P |
| 5790 | S | S.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | S.Eco18249ORF5785P |
| 5795 | DUF4433 domain-containing protein | |||
| 5800 | macro domain-containing protein | |||
| 5805 | R | PmeBin330ORFCP (100% identity) | GAGNNNNNGTTY | Eco18249ORF5785P |
| 5810 | M48 family metallopeptidase | |||
| 12130 | N-6 DNA methylase | |||
| 12135 | R | EcoKTE147ORF3062P (100% identity) | GCCNNNNNGTTT | Eco18249ORF12145P |
| 12140 | S | S.EcoS1C3ORF4992P (100% identity) | GCCNNNNNGTTT | S.Eco18249ORF12145P |
| 12145 | M | M2.EcoS1C3ORF4992P (99% identity) | GCCNNNNNGTTT | M2.Eco18249ORF12145P |
| 12150 | M | M1.EcoS1C3ORF4992P (93% identity) | GCCNNNNNGTTT | M1.Eco18249ORF12145P |
| 12155 | toll/interleukin-1 receptor domain-containing | |||
| 15545 | MmcB family DNA repair protein | |||
| 15550 | R | EcoCase6ORF480P (100% identity) | CAAYNNNNNCTGC | Eco18249ORF15555P |
| 15555 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.Eco18249ORF15555P |
| 15560 | S | S.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | S.Eco18249ORF15555P |
| 15565 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10 | replication endonuclease | |||
| 15 | R | EcoSN137ORF7570P (100% identity) | TGGCCA | Eco18249ORF20P |
| 20 | M | M.Ecoww7ORF20P (100% identity) | TGGCCA | M.Eco18249ORF20P |
| 25 | phage portal protein | |||
| 1055 | phosphohydrolase | |||
| 1060 | M | M.EcoSN137DcmP (100% identity) | CCWGG | M.Eco18249DcmP |
| 1065 | V | V.EcoSN137DcmP (100% identity) | V.Eco18249DcmP | |
| 1070 | drug/metabolite exporter YedA | |||
| 8505 | DUF1317 family protein | |||
| 8510 | M | M.Sbo812ORFAP (100% identity) | M.Eco18249ORF8510P | |
| 8515 | cell division protein ZapA | |||
| 8935 | DUF1804 family protein | |||
| 8940 | M | M.EcoDEC6CORF2124P (100% identity) | M.Eco18249ORF8940P | |
| 8945 | phage terminase large subunit | |||
| 17065 | cell division protein DamX | |||
| 17070 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco18249DamP |
| 17075 | ribulose-phosphate 3-epimerase | |||
| 17700 | DUF2556 family protein | |||
| 17705 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco18249ORF17705P |
| 17710 | DNA-binding transcriptional regulator Fis | |||