Escherichia coli O157:H7 Z563 |
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Putative Escherichia coli O157:H7 Z563 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,502,331 bp | CP062774 |
| plasmid pZ563-1: | 92,772 bp | CP062775 |
REBASE acronym: EcoZ563
Org_num: 46723
All begin ILQ31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24075 | DUF262 domain-containing protein | |||
| 24080 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ563ORF24085P |
| 24085 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ563ORF24085P |
| 24090 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ563ORF24085P |
| 24095 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2295 | cell division protein DamX | |||
| 2300 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ563DamP |
| 2305 | ribulose-phosphate 3-epimerase | |||
| 2810 | DUF2556 family protein | |||
| 2815 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ563ORF2815P |
| 2820 | DNA-binding transcriptional regulator Fis | |||
| 7690 | recombination protein NinB | |||
| 7695 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoZ563ORF7695P |
| 7700 | NinE family protein | |||
| 10140 | recombination protein NinB | |||
| 10145 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ563ORF10145P |
| 10150 | NinE family protein | |||
| 13125 | DUF1737 domain-containing protein | |||
| 13130 | M | M.EcoZ910ORF13805P (100% identity) | M.EcoZ563ORF13130P | |
| 13135 | TrmB family transcriptional regulator | |||
| 13155 | 90 aa hypothetical protein | |||
| 13160 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | EcoZ563ORF13165P |
| 13165 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.EcoZ563ORF13165P |
| 13170 | epoxyqueuosine reductase QueH | |||
| 13765 | DUF1737 domain-containing protein | |||
| 13780 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ563ORF13780P | |
| 13785 | TrmB family transcriptional regulator | |||
| 15985 | drug/metabolite exporter YedA | |||
| 15990 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ563DcmP | |
| 15995 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ563DcmP |
| 16000 | phosphohydrolase | |||
| 24325 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ563ORF24325P |
| 24330 | DEAD/DEAH box helicase | |||
| 24360 | N-acetylneuraminic acid mutarotase | |||
| 24365 | R | Ecos1613ORF26795P (100% identity) | EcoZ563ORF24365P | |
| 24370 | transposase | |||
| plasmid pZ563-1 | ||||
| 27535 | 101 aa hypothetical protein | |||
| 27540 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ563ORF27540P | |
| 27545 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24095 | endoribonuclease SymE | |||
| 24100 | R | EcosPA8GmrSDP (55% identity) | EcoZ563GmrDP | |
| 24105 | R | Ecos1613GmrSP (100% identity) | EcoZ563GmrSP | |
| 24110 | DUF1127 domain-containing protein | |||