Escherichia coli O157:H7 Z570 |
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Putative Escherichia coli O157:H7 Z570 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,553,302 bp | CP062771 |
| plasmid pZ570-1: | 92,751 bp | CP062772 |
REBASE acronym: EcoZ570
Org_num: 46724
All begin ILQ32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24425 | DUF262 domain-containing protein | |||
| 24430 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ570ORF24435P |
| 24435 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ570ORF24435P |
| 24440 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ570ORF24435P |
| 24445 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2290 | cell division protein DamX | |||
| 2295 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ570DamP |
| 2300 | ribulose-phosphate 3-epimerase | |||
| 2805 | DUF2556 family protein | |||
| 2810 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ570ORF2810P |
| 2815 | DNA-binding transcriptional regulator Fis | |||
| 7665 | recombination protein NinB | |||
| 7670 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ570ORF7670P |
| 7675 | NinE family protein | |||
| 10110 | recombination protein NinB | |||
| 10115 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ570ORF10115P |
| 10120 | NinE family protein | |||
| 10920 | phosphohydrolase | |||
| 10925 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ570DcmP |
| 10930 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ570DcmP | |
| 10935 | drug/metabolite exporter YedA | |||
| 13745 | epoxyqueuosine reductase QueH | |||
| 13750 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.EcoZ570ORF13750P |
| 13755 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | EcoZ570ORF13750P |
| 13760 | 90 aa hypothetical protein | |||
| 13780 | TrmB family transcriptional regulator | |||
| 13785 | M | M.EcoZ910ORF13805P (100% identity) | M.EcoZ570ORF13785P | |
| 13790 | DUF1737 domain-containing protein | |||
| 15750 | DUF1737 domain-containing protein | |||
| 15765 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ570ORF15765P | |
| 15770 | TrmB family transcriptional regulator | |||
| 24675 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ570ORF24675P |
| 24680 | DEAD/DEAH box helicase | |||
| 24710 | N-acetylneuraminic acid mutarotase | |||
| 24715 | R | Ecos1613ORF26795P (100% identity) | EcoZ570ORF24715P | |
| 24720 | transposase | |||
| plasmid pZ570-1 | ||||
| 27885 | 101 aa hypothetical protein | |||
| 27890 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ570ORF27890P | |
| 27895 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24445 | endoribonuclease SymE | |||
| 24450 | R | EcosPA8GmrSDP (55% identity) | EcoZ570GmrDP | |
| 24455 | R | Ecos1613GmrSP (100% identity) | EcoZ570GmrSP | |
| 24460 | DUF1127 domain-containing protein | |||