Escherichia coli O157:H7 Z1486 |
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Putative Escherichia coli O157:H7 Z1486 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,516,474 bp | CP062749 |
| plasmid pZ1486-1: | 94,070 bp | CP062750 |
REBASE acronym: EcoZ1486
Org_num: 46699
All begin ILQ41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24145 | DUF262 domain-containing protein | |||
| 24150 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ1486ORF24155P |
| 24155 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ1486ORF24155P |
| 24160 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ1486ORF24155P |
| 24165 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2290 | cell division protein DamX | |||
| 2295 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ1486DamP |
| 2300 | ribulose-phosphate 3-epimerase | |||
| 2805 | DUF2556 family protein | |||
| 2810 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ1486ORF2810P |
| 2815 | DNA-binding transcriptional regulator Fis | |||
| 7665 | recombination protein NinB | |||
| 7670 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoZ1486ORF7670P |
| 7675 | NinE family protein | |||
| 10110 | recombination protein NinB | |||
| 10115 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ1486ORF10115P |
| 10120 | NinE family protein | |||
| 10915 | phosphohydrolase | |||
| 10920 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ1486DcmP |
| 10925 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ1486DcmP | |
| 10930 | drug/metabolite exporter YedA | |||
| 13130 | TrmB family transcriptional regulator | |||
| 13135 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ1486ORF13135P | |
| 13150 | DUF1737 domain-containing protein | |||
| 13745 | epoxyqueuosine reductase QueH | |||
| 13750 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.EcoZ1486ORF13750P |
| 13755 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | EcoZ1486ORF13750P |
| 13760 | 90 aa hypothetical protein | |||
| 13780 | TrmB family transcriptional regulator | |||
| 13785 | M | M.EcoZ910ORF13805P (100% identity) | M.EcoZ1486ORF13785P | |
| 13790 | DUF1737 domain-containing protein | |||
| 24395 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ1486ORF24395P |
| 24400 | DEAD/DEAH box helicase | |||
| 24430 | N-acetylneuraminic acid mutarotase | |||
| 24435 | R | Ecos1613ORF26795P (100% identity) | EcoZ1486ORF24435P | |
| 24440 | transposase | |||
| plasmid pZ1486-1 | ||||
| 27615 | 101 aa hypothetical protein | |||
| 27620 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ1486ORF27620P | |
| 27625 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24165 | endoribonuclease SymE | |||
| 24170 | R | EcosPA8GmrSDP (55% identity) | EcoZ1486GmrDP | |
| 24175 | R | Ecos1613GmrSP (100% identity) | EcoZ1486GmrSP | |
| 24180 | DUF1127 domain-containing protein | |||