Escherichia coli O157:H7 Z1835 |
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Putative Escherichia coli O157:H7 Z1835 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,491,815 bp | CP062700 |
| plasmid pZ1835-1: | 90,792 bp | CP062701 |
REBASE acronym: EcoZ1835
Org_num: 46721
All begin ILQ63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24100 | DUF262 domain-containing protein | |||
| 24105 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ1835ORF24110P |
| 24110 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ1835ORF24110P |
| 24115 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ1835ORF24110P |
| 24120 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2245 | cell division protein DamX | |||
| 2250 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ1835DamP |
| 2255 | ribulose-phosphate 3-epimerase | |||
| 2760 | DUF2556 family protein | |||
| 2765 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ1835ORF2765P |
| 2770 | DNA-binding transcriptional regulator Fis | |||
| 9900 | recombination protein NinB | |||
| 9905 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ1835ORF9905P |
| 9910 | NinE family protein | |||
| 10715 | phosphohydrolase | |||
| 10720 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ1835DcmP |
| 10725 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ1835DcmP | |
| 10730 | drug/metabolite exporter YedA | |||
| 12935 | TrmB family transcriptional regulator | |||
| 12940 | M | M.EcoZ1836ORF13250P (100% identity) | M.EcoZ1835ORF12940P | |
| 12945 | DUF1737 domain-containing protein | |||
| 14970 | DUF1737 domain-containing protein | |||
| 14985 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ1835ORF14985P | |
| 14990 | TrmB family transcriptional regulator | |||
| 22385 | LexA family transcriptional regulator | |||
| 22390 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoZ1835ORF22390P |
| 22395 | PerC family transcriptional regulator | |||
| 24335 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ1835ORF24335P |
| 24340 | DEAD/DEAH box helicase | |||
| 24370 | N-acetylneuraminic acid mutarotase | |||
| 24375 | R | Ecos1613ORF26795P (100% identity) | EcoZ1835ORF24375P | |
| 24380 | transposase | |||
| 24435 | Polarity suppression protein | |||
| 24440 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.EcoZ1835ORF24440P |
| 24445 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | EcoZ1835ORF24440P |
| 24450 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.EcoZ1835ORF24440P |
| 24455 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pZ1835-1 | ||||
| 27540 | 101 aa hypothetical protein | |||
| 27545 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ1835ORF27545P | |
| 27550 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24120 | endoribonuclease SymE | |||
| 24125 | R | EcosPA8GmrSDP (55% identity) | EcoZ1835GmrDP | |
| 24130 | R | Ecos1613GmrSP (100% identity) | EcoZ1835GmrSP | |
| 24135 | DUF1127 domain-containing protein | |||