Escherichia coli O157:H7 Z1836 |
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Putative Escherichia coli O157:H7 Z1836 RM systems
Ref: Fitzgerald,S. et al. unpublished
REBASE ref # 31844
| Sequence length: | GenBank #: | |
| Chromosome: | 5,539,376 bp | CP062778 |
| plasmid pZ1836-1: | 90,783 bp | CP062779 |
REBASE acronym: EcoZ1836
Org_num: 46722
All begin ILQ64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24400 | DUF262 domain-containing protein | |||
| 24405 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoZ1836ORF24410P |
| 24410 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoZ1836ORF24410P |
| 24415 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoZ1836ORF24410P |
| 24420 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2245 | cell division protein DamX | |||
| 2250 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZ1836DamP |
| 2255 | ribulose-phosphate 3-epimerase | |||
| 2760 | DUF2556 family protein | |||
| 2765 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoZ1836ORF2765P |
| 2770 | DNA-binding transcriptional regulator Fis | |||
| 9895 | recombination protein NinB | |||
| 9900 | M | M.Eph2851ORFAP (100% identity) | GATC | M.EcoZ1836ORF9900P |
| 9905 | NinE family protein | |||
| 10710 | phosphohydrolase | |||
| 10715 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZ1836DcmP |
| 10720 | V | V.EcosPA8DcmP (100% identity) | V.EcoZ1836DcmP | |
| 10725 | drug/metabolite exporter YedA | |||
| 11430 | TrmB family transcriptional regulator | |||
| 11435 | M | M.EcoSO63ORF25000P (100% identity) | M.EcoZ1836ORF11435P | |
| 11455 | Shiga toxin Stx2a subunit A | |||
| 13245 | TrmB family transcriptional regulator | |||
| 13250 | M | M.EcoZ1835ORF12940P (100% identity) | M.EcoZ1836ORF13250P | |
| 13255 | DUF1737 domain-containing protein | |||
| 15280 | DUF1737 domain-containing protein | |||
| 15295 | M | M.EcosPA8ORF27255P (100% identity) | M.EcoZ1836ORF15295P | |
| 15300 | TrmB family transcriptional regulator | |||
| 22685 | LexA family transcriptional regulator | |||
| 22690 | M | M.EcoZ1835ORF22390P (100% identity) | GATC | M.EcoZ1836ORF22690P |
| 22695 | PerC family transcriptional regulator | |||
| 24635 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoZ1836ORF24635P |
| 24640 | DEAD/DEAH box helicase | |||
| 24670 | N-acetylneuraminic acid mutarotase | |||
| 24675 | R | Ecos1613ORF26795P (100% identity) | EcoZ1836ORF24675P | |
| 24680 | transposase | |||
| 24735 | Polarity suppression protein | |||
| 24740 | M | M.EcoZ1835ORF24440P (100% identity) | RGGNCCY | M.EcoZ1836ORF24740P |
| 24745 | R | EcoZ1835ORF24440P (100% identity) | RGGNCCY | EcoZ1836ORF24740P |
| 24750 | C | C.EcoZ1835ORF24440P (100% identity) | CTAAGNNNNNCTTAG | C.EcoZ1836ORF24740P |
| 24755 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pZ1836-1 | ||||
| 27840 | 101 aa hypothetical protein | |||
| 27845 | M | M.EcosPA8ORF27775P (100% identity) | M.EcoZ1836ORF27845P | |
| 27850 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24420 | endoribonuclease SymE | |||
| 24425 | R | EcosPA8GmrSDP (55% identity) | EcoZ1836GmrDP | |
| 24430 | R | Ecos1613GmrSP (100% identity) | EcoZ1836GmrSP | |
| 24435 | DUF1127 domain-containing protein | |||