Escherichia coli RIVM_C018150 |
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Putative Escherichia coli RIVM_C018150 RM systems
Ref: Hendrickx,A.P.A. et al. unpublished
REBASE ref # 31854
Complete sequence: 4,335,633 bp
GenBank #: CP068996
REBASE acronym: Eco18150
Org_num: 46761
All begin JNN80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8695 | DUF262 domain-containing protein | |||
| 8700 | R | EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | Eco18150ORF8705P |
| 8705 | M | M.EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | M.Eco18150ORF8705P |
| 8710 | S | S.EcosA32I (100% identity) | GGANNNNNNNNATGC | S.Eco18150ORF8705P |
| 8715 | endoribonuclease SymE | |||
| 9060 | MmcB family DNA repair protein | |||
| 9065 | R | EcoCase6ORF480P (100% identity) | CAAYNNNNNCTGC | Eco18150ORF9070P |
| 9070 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.Eco18150ORF9070P |
| 9075 | S | S.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | S.Eco18150ORF9070P |
| 9080 | ATP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8425 | phage holin, lambda family | |||
| 8430 | M | M.Ecoi127aORF3990P (100% identity) | M.Eco18150ORF8430P | |
| 8435 | 67 aa hypothetical protein | |||
| 8470 | LexA family transcriptional regulator | |||
| 8475 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco18150ORF8475P |
| 8480 | PerC family transcriptional regulator | |||
| 8890 | HNH endonuclease | |||
| 8895 | R | Ecoi127aORF4076P (100% identity) | Eco18150ORF8895P | |
| 8900 | 59 aa hypothetical protein | |||
| 10755 | cell division protein DamX | |||
| 10760 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco18150DamP |
| 10765 | ribulose-phosphate 3-epimerase | |||
| 11355 | DUF2556 family protein | |||
| 11360 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco18150ORF11360P |
| 11365 | DNA-binding transcriptional regulator Fis | |||
| 18700 | phosphohydrolase | |||
| 18705 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco18150DcmP |
| 18710 | V | V.SflC32DcmP (74% identity) | V.Eco18150DcmP | |
| 18715 | drug/metabolite exporter YedA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8715 | endoribonuclease SymE | |||
| 8720 | R | EcoRb3GmrSDP (100% identity) | Eco18150GmrSDP | |
| 8725 | 26 aa hypothetical protein | |||