Dickeya solani IPO2019 |
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Putative Dickeya solani IPO2019 RM systems
Ref: Rabalski,L. et al. bioRxiv (2021)
REBASE ref # 31945
Complete sequence: 4,919,542 bp
GenBank #: CP071062
REBASE acronym: Dso2019
Org_num: 47227
All begin JYR06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2130 | integrase arm-type DNA-binding domain-containing | |||
| 2135 | M | M.DsoMK16ORFBP (100% identity) | CNCANNNNNNNRTGG | M.Dso2019ORF2135P |
| 2140 | S | S.DsoMK16ORFBP (100% identity) | CNCANNNNNNNRTGG | S.Dso2019ORF2135P |
| 2145 | R | DsoMK16ORFBP (100% identity) | CNCANNNNNNNRTGG | Dso2019ORF2135P |
| 2150 | virulence RhuM family protein | |||
| 3315 | 196 aa hypothetical protein | |||
| 3320 | S | S.DsoMK16ORFAP (100% identity) | GAACNNNNNTGC | S.Dso2019ORF3325P |
| 3325 | M | M.DsoMK16ORFAP (100% identity) | GAACNNNNNTGC | M.Dso2019ORF3325P |
| 3330 | R | DsoMK16ORFAP (100% identity) | GAACNNNNNTGC | Dso2019ORF3325P |
| 3335 | ribosomal protein S18-alanine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2210 | amino acid transporter | |||
| 2215 | R | Dso99ORF445P (100% identity) | Dso2019ORF2215P | |
| 2220 | MFS transporter | |||
| 8325 | 95 aa hypothetical protein | |||
| 8330 | M | M.Dso34ORF8340P (100% identity) | M.Dso2019ORF8330P | |
| 8335 | ATP-binding protein | |||
| 14620 | 53 aa hypothetical protein | |||
| 14625 | R | Dso421ORF2965P (100% identity) | Dso2019ORF14625P | |
| 14630 | transposase | |||
| 19395 | ribulose-phosphate 3-epimerase | |||
| 19400 | M | M.DsoMK16ORFEP (100% identity) | GATC | M.Dso2019DamP |
| 19405 | SPOR domain-containing protein | |||