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Putative Treponema ruminis RU1 RM systems
Ref: Staton,G.J. et al. unpublished
REBASE ref # 32487
Complete sequence: 2,895,582 bp
GenBank #: CP031518
REBASE acronym: TruRU1
Org_num: 49768
All begin DYE50_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
4145 | L-lactate dehydrogenase | |||
4150 | R | TsuC27ORF13455P (94% identity) | TruRU1ORF4175P | |
4155 | Fic family protein | |||
4160 | 785 aa hypothetical protein | |||
4165 | DUF262 domain-containing protein | |||
4170 | S | S.TsuC27ORF13455P (56% identity) | S.TruRU1ORF4175P | |
4175 | M | M.TreCHPAORF11600P (96% identity) | M.TruRU1ORF4175P | |
4180 | MetQ/NlpA family ABC transporter | |||
4910 | ribonuclease Z | |||
4915 | R | Tvi802ORF9925P (77% identity) | TruRU1ORF4960P | |
4920 | Fic family protein | |||
4925 | DUF4427 domain-containing protein | |||
4930 | S | S.GloSZORF1415P (34% identity) | S.TruRU1ORF4960P | |
4935 | 343 aa hypothetical protein | |||
4940 | 513 aa hypothetical protein | |||
4945 | 77 aa hypothetical protein | |||
4950 | cell filamentation protein Fic | |||
4955 | 445 aa hypothetical protein | |||
4960 | M | M.TbaRmG11ORF7290P (77% identity) | M.TruRU1ORF4960P | |
4965 | ABC transporter ATP-binding protein | |||
7405 | ATP-dependent Clp protease ATP-binding subunit | |||
7410 | R | TspJC4ORF20940P (94% identity) | TruRU1ORF7445P | |
7415 | cell filamentation protein Fic | |||
7420 | 164 aa hypothetical protein | |||
7425 | 241 aa hypothetical protein | |||
7430 | S | S2.PmeBin155ORFBP (31% identity) | S.TruRU1ORF7445P | |
7435 | 288 aa hypothetical protein | |||
7440 | winged helix-turn-helix transcriptional | |||
7445 | M | M.TspJC4ORF21630P (95% identity) | M.TruRU1ORF7445P | |
7450 | 83 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
155 | PAP2 family protein | |||
160 | M | M.Tsa32279ORF5750P (55% identity) | M.TruRU1ORF160P | |
165 | DUF4105 domain-containing protein | |||
1560 | DUF3791 domain-containing protein | |||
1565 | M | M.BspSD4ORF22655P (48% identity) | M.TruRU1ORF1565P | |
1570 | R | R1.Tsa32279ORF23400P (35% identity) | R1.TruRU1ORF1565P | |
1575 | R | R2.Tsa32279ORF23400P (68% identity) | R2.TruRU1ORF1565P | |
1580 | ATP-binding protein | |||
1585 | V | V.TspJC4ORFAP (78% identity) | V.TruRU1ORF1565P | |
1590 | DUF72 domain-containing protein | |||
5440 | Fic family protein | |||
5445 | M | M1.Tsu2489ORF1691P (79% identity) | M1.TruRU1ORF5445P | |
5450 | R | PmeBin428ORFAP (35% identity) | R1.TruRU1ORF5445P | |
5455 | R | PmeBin376ORFEP (69% identity) | R2.TruRU1ORF5445P | |
5460 | M | M3.Tsu2489ORF1691P (71% identity) | M2.TruRU1ORF5445P | |
5465 | 549 aa hypothetical protein | |||
10360 | XRE family transcriptional regulator | |||
10365 | RM | Cco77ORF8145P (48% identity) | TruRU1ORF10365P | |
10370 | CAP domain-containing protein | |||
10860 | O-acetylhomoserine | |||
10865 | M | M.Tsu2489V (69% identity) | M.TruRU1ORF10865P | |
10870 | peptidase | |||
11710 | 326 aa hypothetical protein | |||
11715 | M | M.Eol17448ORF177P (47% identity) | M.TruRU1ORF11715P | |
11720 | 218 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
6480 | 397 aa hypothetical protein | |||
6485 | M | M.SspNJ44ORFGP (48% identity) | M.TruRU1ORF6485P | |
6490 | R | Tpa843ORF6555P (46% identity) | TruRU1ORF6485P | |
6495 | 121 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
6440 | 105 aa hypothetical protein | |||
6445 | R | BfrFAAMcrBP (22% identity) | TruRU1McrBP | |
6450 | R | TbaRmG11McrCP (27% identity) | TruRU1McrCP | |
6455 | 913 aa hypothetical protein |