Salmonella enterica subsp. enterica serovar Typhimurium AB42052 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium AB42052 RM systems
Ref: Cohen,E. et al. unpublished
REBASE ref # 31885
Complete sequence: 4,860,617 bp
GenBank #: CP064918
REBASE acronym: Sen42052
Org_num: 46929
All begin IRY58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23255 | endoribonuclease SymE | |||
| 23260 | S | S.Sen42142ORF23310P (100% identity) | GAGNNNNNNRTAYG | S.Sen42052ORF23265P |
| 23265 | M | M.Sen42142ORF23310P (100% identity) | GAGNNNNNNRTAYG | M.Sen42052ORF23265P |
| 23270 | R | Sen42142ORF23310P (99% identity) | GAGNNNNNNRTAYG | Sen42052ORF23265P |
| 23275 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10300 | drug/metabolite exporter YedA | |||
| 10305 | V | V.SenSTy03DcmP (98% identity) | V.Sen42052DcmP | |
| 10310 | M | M.StyUK1Dcm (99% identity) | CCWGG | M.Sen42052DcmP |
| 10315 | phosphohydrolase | |||
| 10545 | RusA family crossover junction | |||
| 10550 | M | M.StyUK1V (100% identity) | GATC | M.Sen42052ORF10550P |
| 10555 | PerC family transcriptional regulator | |||
| 13885 | 92 aa hypothetical protein | |||
| 13890 | M | M.Sen42142ORF13895P (99% identity) | M.Sen42052ORF13890P | |
| 13895 | ead/Ea22-like family protein | |||
| 17520 | DNA-binding transcriptional regulator Fis | |||
| 17525 | M | M.Sen42142ORF17525P (100% identity) | ATGCAT | M.Sen42052ORF17525P |
| 17530 | DUF2556 family protein | |||
| 21075 | cell division protein DamX | |||
| 21080 | M | M.Sen42086DamP (100% identity) | GATC | M.Sen42052DamP |
| 21085 | ribulose-phosphate 3-epimerase | |||
| 23105 | ATP-binding protein | |||
| 23110 | RM | Sen42086ORF23155P (100% identity) | GATCAG | Sen42052ORF23110P |
| 23115 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2135 | MFS transporter | |||
| 2140 | M | M.Sen42086ORF2150P (100% identity) | CAGAG | M.Sen42052ORF2140P |
| 2145 | R | Sen42142ORF2165P (99% identity) | CAGAG | Sen42052ORF2140P |
| 2150 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23270 | type I restriction-modification system | |||
| 23275 | R | Sen42086Mrr2P (100% identity) | Sen42052MrrP | |
| 23280 | BrnT family toxin | |||