Salmonella enterica subsp. enterica serovar Typhimurium AB42142 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium AB42142 RM systems
Ref: Cohen,E. et al. unpublished
REBASE ref # 31885
Complete sequence: 4,855,068 bp
GenBank #: CP064916
REBASE acronym: Sen42142
Org_num: 46931
All begin IRY60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23300 | endoribonuclease SymE | |||
| 23305 | S | S.Sen42086ORF23310P (100% identity) | GAGNNNNNNRTAYG | S.Sen42142ORF23310P |
| 23310 | M | M.Sen42052ORF23265P (100% identity) | GAGNNNNNNRTAYG | M.Sen42142ORF23310P |
| 23315 | R | StyUK1IIP (99% identity) | GAGNNNNNNRTAYG | Sen42142ORF23310P |
| 23320 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10290 | drug/metabolite exporter YedA | |||
| 10295 | V | V.Sen42086DcmP (100% identity) | V.Sen42142DcmP | |
| 10300 | M | M.Sen42086DcmP (100% identity) | CCWGG | M.Sen42142DcmP |
| 10305 | phosphohydrolase | |||
| 10545 | RusA family crossover junction | |||
| 10550 | M | M.StyUK1V (100% identity) | GATC | M.Sen42142ORF10550P |
| 10555 | PerC family transcriptional regulator | |||
| 13890 | 92 aa hypothetical protein | |||
| 13895 | M | M.Sen42052ORF13890P (99% identity) | M.Sen42142ORF13895P | |
| 13900 | ead/Ea22-like family protein | |||
| 17520 | DNA-binding transcriptional regulator Fis | |||
| 17525 | M | M.Sen42086ORF17555P (100% identity) | ATGCAT | M.Sen42142ORF17525P |
| 17530 | DUF2556 family protein | |||
| 21100 | cell division protein DamX | |||
| 21105 | M | M.StyTDamP (100% identity) | GATC | M.Sen42142DamP |
| 21110 | ribulose-phosphate 3-epimerase | |||
| 23145 | AAA family ATPase | |||
| 23150 | RM | Sen42086ORF23155P (99% identity) | GATCAG | Sen42142ORF23150P |
| 23155 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2160 | MFS transporter | |||
| 2165 | M | M.Sen42086ORF2150P (99% identity) | CAGAG | M.Sen42142ORF2165P |
| 2170 | R | Sen42052ORF2140P (99% identity) | CAGAG | Sen42142ORF2165P |
| 2175 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23120 | ATP-binding protein | |||
| 23125 | R | Sen42086MrrP (100% identity) | Sen42142MrrP | |
| 23130 | protease Lon-related BREX system protein BrxL | |||
| 23315 | type I restriction-modification system | |||
| 23320 | R | Sen42086Mrr2P (99% identity) | Sen42142Mrr2P | |
| 23325 | BrnT family toxin | |||