Escherichia coli EF5-18-41 |
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Putative Escherichia coli EF5-18-41 RM systems
Ref: Moser,A.I. et al. unpublished
REBASE ref # 31808
Complete sequence: 5,389,948 bp
GenBank #: CP063492
REBASE acronym: Eco1841
Org_num: 46558
All begin IQS14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6490 | endoribonuclease SymE | |||
| 6495 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco1841ORF6500P |
| 6500 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco1841ORF6500P |
| 6505 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | Eco1841ORF6500P |
| 6510 | adenine/cytosine-specific restriction | |||
| 23720 | type II toxin-antitoxin system RelB/DinJ family | |||
| 23725 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.Eco1841ORF23725P |
| 23730 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.Eco1841ORF23725P |
| 23735 | R | EcoPK8276ORF23685P (100% identity) | ACYNNNNNNGTTC | Eco1841ORF23725P |
| 23740 | 184 aa hypothetical protein | |||
| 25020 | transposase | |||
| 25025 | R | SenSI167ORF3215P (100% identity) | Eco1841ORF25040P | |
| 25030 | DUF4268 domain-containing protein | |||
| 25035 | S | S.SenSI167ORF3215P (100% identity) | S.Eco1841ORF25040P | |
| 25040 | M | M.SenSI167ORF3215P (100% identity) | M.Eco1841ORF25040P | |
| 25045 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 470 | ribulose-phosphate 3-epimerase | |||
| 475 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco1841DamP |
| 480 | cell division protein DamX | |||
| 4195 | PerC family transcriptional regulator | |||
| 4200 | M | M.SdyFF10ORF21495P (100% identity) | GATC | M.Eco1841ORF4200P |
| 4205 | LexA family transcriptional regulator | |||
| 4230 | 67 aa hypothetical protein | |||
| 4235 | M | M.Sso63633ORF22290P (100% identity) | M.Eco1841ORF4235P | |
| 4240 | phage lysis protein EssD | |||
| 13730 | recombination protein NinB | |||
| 13735 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco1841ORF13735P |
| 13740 | NinE family protein | |||
| 17975 | drug/metabolite exporter YedA | |||
| 17980 | V | V.Ecostr9DcmP (74% identity) | V.Eco1841DcmP | |
| 17985 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.Eco1841DcmP |
| 17990 | phosphohydrolase | |||
| 21165 | PerC family transcriptional regulator | |||
| 21170 | M | M.EcosS1ORF2855P (100% identity) | M.Eco1841ORF21170P | |
| 21175 | serine/threonine protein phosphatase | |||
| 26130 | DNA-binding transcriptional regulator Fis | |||
| 26135 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.Eco1841ORF26135P |
| 26140 | DUF2556 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6480 | R | SenHNK130McrCP (100% identity) | Eco1841McrCP | |
| 6485 | R | SenHNK130McrBP (100% identity) | Eco1841McrBP | |
| 6490 | endoribonuclease SymE | |||
| 6505 | type I restriction-modification system | |||
| 6510 | R | Ssp28760MrrP (99% identity) | Eco1841MrrP | |
| 6515 | GTPase | |||