Escherichia coli EM03-18-08 |
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Putative Escherichia coli EM03-18-08 RM systems
Ref: Moser,A.I. et al. unpublished
REBASE ref # 31808
| Sequence length: | GenBank #: | |
| Chromosome: | 4,766,198 bp | CP063483 |
| plasmid pEM03-18-08_1: | 77,443 bp | CP063484 |
| plasmid pEM03-18-08_2: | 39,096 bp | CP063485 |
REBASE acronym: Eco1808
Org_num: 46566
All begin IQS21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 120 | transposase | |||
| 125 | R | EcosS1ORF25140P (99% identity) | TGANNNNNNCTTC | Eco1808ORF130P |
| 130 | M | M.SspZ54ORF5015P (99% identity) | TGANNNNNNCTTC | M.Eco1808ORF130P |
| 135 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco1808ORF130P |
| 140 | AAA family ATPase | |||
| 22765 | DUF4942 domain-containing protein | |||
| 22770 | M | M.SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | M.Eco1808ORF22770P |
| ??? | S | S.SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | S.Eco1808ORF22770P |
| 22785 | R | SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | Eco1808ORF22770P |
| 22790 | 48 aa hypothetical protein | |||
| plasmid pEM03-18-08_1 | ||||
| 23200 | ANR family transcriptional regulator | |||
| 23205 | R | SenS1545ORF24780P (100% identity) | Eco1808ORF23210P | |
| 23210 | M | M.SenS1545ORF24780P (100% identity) | M.Eco1808ORF23210P | |
| 23215 | chromosome segregation protein SMC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3455 | osmoprotectant transport activator ProQ | |||
| 3460 | M | M.SflFF24DndBP (100% identity) | M.Eco1808DndBP | |
| 3465 | DNA phosphorothioation system sulfurtransferase | |||
| 3460 | DNA sulfur modification protein DndB | |||
| 3465 | M | M.SflFF24DndCP (100% identity) | M.Eco1808DndCP | |
| 3470 | DNA sulfur modification protein DndD | |||
| 3465 | DNA phosphorothioation system sulfurtransferase | |||
| 3470 | M | M.SflFF24DndDP (99% identity) | M.Eco1808DndDP | |
| 3475 | DNA sulfur modification protein DndE | |||
| 3470 | DNA sulfur modification protein DndD | |||
| 3475 | M | M.SflFF24DndEP (100% identity) | M.Eco1808DndEP | |
| 3480 | DGQHR domain-containing protein | |||
| 3485 | 172 aa hypothetical protein | |||
| 3490 | R | Eco16843DptHP (100% identity) | Eco1808DptHP | |
| 3495 | DNA phosphorothioation-dependent restriction | |||
| 3490 | DNA phosphorothioation-dependent restriction | |||
| 3495 | R | SenLY67DptGP (100% identity) | Eco1808DptGP | |
| 3500 | DNA phosphorothioation-dependent restriction | |||
| 3495 | DNA phosphorothioation-dependent restriction | |||
| 3500 | R | SenLY67DptFP (100% identity) | Eco1808DptFP | |
| 3505 | porin family protein | |||
| 4980 | cell division protein DamX | |||
| 4985 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1808DamP |
| 4990 | ribulose-phosphate 3-epimerase | |||
| 5595 | DUF2556 family protein | |||
| 5600 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco1808ORF5600P |
| 5605 | DNA-binding transcriptional regulator Fis | |||
| 12070 | recombination protein NinB | |||
| 12075 | M | M.EcosB7AORFBP (100% identity) | GATC | M.Eco1808ORF23465P |
| 12080 | phosphoadenosine phosphosulfate reductase family | |||
| 12485 | phosphohydrolase | |||
| 12490 | M | M.SflN92DcmP (100% identity) | CCWGG | M.Eco1808DcmP |
| 12495 | V | V.SsoSE61DcmP (100% identity) | V.Eco1808DcmP | |
| 12500 | drug/metabolite exporter YedA | |||
| 14475 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco1808ORF14480P | |
| 14485 | IS66-like element ISEc22 family transposase | |||
| 22745 | HNH endonuclease | |||
| 22750 | R | SflSTLE4ORF19250P (100% identity) | Eco1808ORF22750P | |
| 22755 | McrC family protein | |||
| plasmid pEM03-18-08_1 | ||||
| 22915 | 103 aa hypothetical protein | |||
| 22920 | M | M.Sso11ORF329P (100% identity) | M.Eco1808ORF22920P | |
| 22925 | 73 aa hypothetical protein | |||
| plasmid pEM03-18-08_2 | ||||
| 23460 | phosphoadenosine phosphosulfate reductase family | |||
| 23465 | M | M.EcosB7AORFBP (100% identity) | GATC | M.Eco1808ORF23465P |
| 23470 | recombination protein NinB | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22750 | HNH endonuclease | |||
| 22755 | R | SflSTLE4McrCP (100% identity) | Eco1808McrCP | |
| 22760 | R | SflSTLE4McrBP (100% identity) | Eco1808McrBP | |
| 22765 | DUF4942 domain-containing protein | |||