Pseudomonas aeruginosa B17932 |
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Putative Pseudomonas aeruginosa B17932 RM systems
Ref: Veeraraghavan,B. et al. unpublished
REBASE ref # 32037
Complete sequence: 6,847,382 bp
GenBank #: CP070471
REBASE acronym: PaeB17932
Org_num: 48720
All begin JT750_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 495 | site-specific integrase | |||
| 500 | M | M.Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | M.PaeB17932ORF500P |
| 505 | S | S.Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | S.PaeB17932ORF500P |
| 510 | R | Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | PaeB17932ORF500P |
| 515 | helix-turn-helix transcriptional regulator | |||
| 2065 | M48 family metallopeptidase | |||
| 2070 | R | Ssp0042ORF670P (100% identity) | TCCANNNNNNCGT | PaeB17932ORF2105P |
| 2075 | VWA domain-containing protein | |||
| 2080 | AAA family ATPase | |||
| 2085 | PD-(D/E)XK nuclease family protein | |||
| 2090 | virulence RhuM family protein | |||
| 2095 | 410 aa hypothetical protein | |||
| 2100 | S | S.PmoB5ORF1050P (100% identity) | TCCANNNNNNCGT | S.PaeB17932ORF2105P |
| 2105 | M | M.PmoB5ORF1050P (100% identity) | TCCANNNNNNCGT | M.PaeB17932ORF2105P |
| 2110 | restriction endonuclease subunit S | |||
| 2330 | peptidase M15 | |||
| 2335 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | PaeB17932ORF2345P |
| 2340 | HNH endonuclease | |||
| 2345 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.PaeB17932ORF2345P |
| 2350 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.PaeB17932ORF2345P |
| 2355 | DUF91 domain-containing protein | |||
| 31505 | virulence RhuM family protein | |||
| 31510 | R | SacT018ORFDP (99% identity) | CAGNNNNNNCTCG | PaeB17932ORF31525P |
| 31515 | anticodon nuclease | |||
| 31520 | S | S.Pae9BRORFHP (100% identity) | CAGNNNNNNCTCG | S.PaeB17932ORF31525P |
| 31525 | M | M.SacT018ORFDP (100% identity) | CAGNNNNNNCTCG | M.PaeB17932ORF31525P |
| 31530 | MarR family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| ??? | RM | PaeP13ORF7605P (100% identity) | PaeB17932ORF25P | |
| 30 | 68 aa hypothetical protein | |||
| 6855 | Arc family DNA-binding protein | |||
| 6860 | M | M.Paes32ORF1382P (100% identity) | M.PaeB17932ORF6860P | |
| 6865 | nucleoid-associated protein YejK | |||
| 19600 | BREX-1 system phosphatase PglZ type A | |||
| 19605 | RM | PaeP13ORF19625P (97% identity) | PaeB17932ORF19605P | |
| 19610 | 62 aa hypothetical protein | |||
| 19620 | 55 aa hypothetical protein | |||
| 19625 | RM | PaeP13ORF19605P (100% identity) | PaeB17932ORF19625P | |
| 19630 | BREX system P-loop protein BrxC | |||
| 20130 | IS3 family transposase | |||
| 20135 | M | M.PaeP13ORF19105P (100% identity) | M.PaeB17932ORF20135P | |
| 20140 | 70 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19565 | IS3 family transposase | |||
| 19570 | R | Paes32ORF4058P (100% identity) | CACACC | PaeB17932ORF19575P |
| 19575 | M | M.Paes32ORF4058P (100% identity) | CACACC | M.PaeB17932ORF19575P |
| 19580 | AIPR family protein | |||