Escherichia coli CFSAN083829 |
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Putative Escherichia coli CFSAN083829 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 31816
| Sequence length: | GenBank #: | |
| Chromosome: | 5,586,381 bp | CP070393 |
| plasmid pCFSAN083829_1: | 232,795 bp | CP070394 |
| plasmid pCFSAN083829_2: | 154,443 bp | CP070395 |
| plasmid pCFSAN083829_3: | 105,582 bp | CP070396 |
REBASE acronym: Eco3829
Org_num: 46539
All begin JNP96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3885 | endoribonuclease SymE | |||
| 3890 | R | EcoR31ORF16485P (100% identity) | CGTANNNNNGTC | Eco3829ORF3900P |
| 3895 | S | S.EcoSH3ORF25175P (100% identity) | CGTANNNNNGTC | S.Eco3829ORF3900P |
| ??? | M | M.EcoEc387ORF37080P (100% identity) | CGTANNNNNGTC | M.Eco3829ORF3900P |
| 3905 | restriction endonuclease | |||
| 23140 | transposase domain-containing protein | |||
| 23145 | S | S.SflN101ORF19075P (100% identity) | GAACNNNNNTGC | S.Eco3829ORF23150P |
| 23150 | M | M.Sen6640ORF2690P (100% identity) | GAACNNNNNTGC | M.Eco3829ORF23150P |
| 23155 | R | EmaC12ORF18910P (100% identity) | GAACNNNNNTGC | Eco3829ORF23150P |
| 23160 | transposase domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1695 | PerC family transcriptional regulator | |||
| 1700 | M | M.Efe1438ORF17305P (100% identity) | GATC | M.Eco3829ORF1700P |
| 1705 | LexA family transcriptional regulator | |||
| 11020 | PerC family transcriptional regulator | |||
| 11025 | M | M.Eco13462ORF951P (100% identity) | GATC | M.Eco3829ORF11025P |
| 11030 | LexA family transcriptional regulator | |||
| 12740 | TrmB family transcriptional regulator | |||
| 12745 | M | M.EcoB8S18ORF26510P (99% identity) | M.Eco3829ORF12745P | |
| 12750 | class II holin family protein | |||
| 16470 | drug/metabolite exporter YedA | |||
| 16475 | V | V.SsoSE61DcmP (100% identity) | V.Eco3829DcmP | |
| 16480 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco3829DcmP |
| 16485 | phosphohydrolase | |||
| 16700 | class II holin family protein | |||
| 16705 | M | M.EcoB8S18ORF26510P (99% identity) | M.Eco3829ORF16705P | |
| 16710 | TrmB family transcriptional regulator | |||
| 17645 | phage portal protein | |||
| 17650 | M | M.EcoS19141ORF25P (100% identity) | M.Eco3829ORF17650P | |
| 17655 | C | C.Sen24590ORF20925P (100% identity) | C.Eco3829ORF17650P | |
| 17660 | R | Ecostr10ORF20P (100% identity) | GRGCYC | Eco3829ORF17650P |
| 17665 | replication endonuclease | |||
| 19450 | NinE family protein | |||
| 19455 | M | M.EcoLHM101ORFIP (96% identity) | GATC | M.Eco3829ORF19455P |
| 19460 | recombination protein NinB | |||
| 22615 | CcdB family protein | |||
| 22620 | M | M.SenH18ORF28321P (100% identity) | M.Eco3829ORF22620P | |
| 22625 | R | EcoUM1886ORF4655P (100% identity) | Eco3829ORF22620P | |
| 22630 | type B 50S ribosomal protein L31 | |||
| 25105 | DNA-binding transcriptional regulator Fis | |||
| 25110 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco3829ORF25110P |
| 25115 | DUF2556 family protein | |||
| 25730 | ribulose-phosphate 3-epimerase | |||
| 25735 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3829DamP |
| 25740 | cell division protein DamX | |||
| plasmid pCFSAN083829_1 | ||||
| 28340 | 284 aa hypothetical protein | |||
| 28345 | M | M.YpsF1ORFDP (100% identity) | M.Eco3829ORF28345P | |
| 28350 | DNA-binding protein | |||
| 28470 | 202 aa hypothetical protein | |||
| 28475 | M | M.YpsF1ORFBP (100% identity) | M.Eco3829ORF28475P | |
| 28480 | 48 aa hypothetical protein | |||
| 28905 | thermonuclease family protein | |||
| 28910 | M | M.YpsF1ORFCP (100% identity) | M.Eco3829ORF28910P | |
| 28915 | 55 aa hypothetical protein | |||
| plasmid pCFSAN083829_2 | ||||
| 29655 | 73 aa hypothetical protein | |||
| 29660 | M | M.Eco13462ORF19P (100% identity) | SAY | M.Eco3829ORF29660P |
| 29665 | IS3 family transposase | |||
| plasmid pCFSAN083829_3 | ||||
| 30530 | 73 aa hypothetical protein | |||
| 30535 | M | M.UbapRSB107ORFAP (99% identity) | M.Eco3829ORF30535P | |
| 30540 | 102 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22540 | IS3 family transposase | |||
| 22545 | M | M.SenH18ORF28191P (100% identity) | M.Eco3829ORF22545P | |
| 22550 | R | EcoUM1886ORF4740P (100% identity) | Eco3829ORF22545P | |
| 22555 | DUF1281 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11235 | site-specific DNA recombinase | |||
| 11240 | R | EcoMB19ORF20745P (100% identity) | YCGR | Eco3829ORF11240P |
| 11245 | isocitrate dehydrogenase | |||