Escherichia coli CFSAN083828 |
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Putative Escherichia coli CFSAN083828 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 31816
| Sequence length: | GenBank #: | |
| Chromosome: | 5,074,354 bp | CP070399 |
| plasmid pCFSAN083828_1: | 239,190 bp | CP070398 |
| plasmid pCFSAN083828_2: | 195,911 bp | CP070400 |
REBASE acronym: Eco3828
Org_num: 46538
All begin JNP94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4630 | transposase domain-containing protein | |||
| 4635 | M | M.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | M.Eco3828ORF4635P |
| 4640 | AAA family ATPase | |||
| 4645 | S | S2.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | S.Eco3828ORF4635P |
| 4650 | R | SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | Eco3828ORF4635P |
| 4655 | IS3 family transposase | |||
| 23010 | DUF45 domain-containing protein | |||
| 23015 | M | M.Ecostr10ORF18570P (100% identity) | M.Eco3828ORF23015P | |
| 23020 | S | S.Ecostr10ORF18570P (100% identity) | S.Eco3828ORF23015P | |
| 23025 | 61 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2970 | cell division protein DamX | |||
| 2975 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3828DamP |
| 2980 | ribulose-phosphate 3-epimerase | |||
| 3525 | DUF2556 family protein | |||
| 3530 | M | M.Eco43C19ORF2250P (99% identity) | ATGCAT | M.Eco3828ORF3530P |
| 3535 | DNA-binding transcriptional regulator Fis | |||
| 10870 | TrmB family transcriptional regulator | |||
| 10875 | M | M.EcoM9812ORF25780P (96% identity) | M.Eco3828ORF10875P | |
| 10890 | tellurite/colicin resistance protein | |||
| 12015 | TrmB family transcriptional regulator | |||
| 12020 | M | M.Eco43C19ORF14485P (100% identity) | M.Eco3828ORF12020P | |
| 12035 | tellurite resistance TerB family protein | |||
| 12975 | TrmB family transcriptional regulator | |||
| 12980 | M | M.Eco43C19ORF13390P (100% identity) | M.Eco3828ORF12980P | |
| 13005 | holin | |||
| 16765 | drug/metabolite exporter YedA | |||
| 16770 | V | V.EcosEC71DcmP (100% identity) | V.Eco3828DcmP | |
| 16775 | M | M.EcosEC71DcmP (100% identity) | CCWGG | M.Eco3828DcmP |
| 16780 | phosphohydrolase | |||
| 16995 | holin | |||
| 17010 | M | M.EcoM9812ORF25780P (99% identity) | M.Eco3828ORF17010P | |
| 17015 | TrmB family transcriptional regulator | |||
| 18100 | 66 aa hypothetical protein | |||
| 18105 | M | M.Eco43C19ORF16650P (100% identity) | M.Eco3828ORF18105P | |
| 18110 | DUF2732 family protein | |||
| 18600 | NinE family protein | |||
| 18605 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco3828ORF18605P |
| 18610 | recombination protein NinB | |||
| 22940 | HNH endonuclease | |||
| 22945 | R | EcoPK8566ORF2340P (100% identity) | Eco3828ORF22945P | |
| 22950 | 332 aa hypothetical protein | |||
| 22965 | BREX system P-loop protein BrxC | |||
| 22970 | RM | EcoE18005ORF1635P (100% identity) | Eco3828ORF22970P | |
| 22975 | BREX-1 system phosphatase PglZ type A | |||
| 24365 | LexA family transcriptional regulator | |||
| 24370 | M | M.SflN101ORF11410P (100% identity) | GATC | M.Eco3828ORF24370P |
| 24375 | PerC family transcriptional regulator | |||
| plasmid pCFSAN083828_1 | ||||
| 210 | thermonuclease family protein | |||
| 215 | M | M.YpsF1ORFCP (100% identity) | M.Eco3828ORF215P | |
| 220 | 55 aa hypothetical protein | |||
| 920 | 284 aa hypothetical protein | |||
| 925 | M | M.YpsF1ORFDP (100% identity) | M.Eco3828ORF925P | |
| 930 | DNA-binding protein | |||
| 1050 | 202 aa hypothetical protein | |||
| 1055 | M | M.YpsF1ORFBP (100% identity) | M.Eco3828ORF1055P | |
| 1060 | 48 aa hypothetical protein | |||
| plasmid pCFSAN083828_2 | ||||
| 27270 | 103 aa hypothetical protein | |||
| 27275 | M | M.EcoSCU488ORF25195P (100% identity) | M.Eco3828ORF27275P | |
| 27280 | 73 aa hypothetical protein | |||