Escherichia coli CFSAN083827 |
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Putative Escherichia coli CFSAN083827 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 31816
| Sequence length: | GenBank #: | |
| Chromosome: | 4,900,076 bp | CP070403 |
| plasmid pCFSAN083827_1: | 247,443 bp | CP070406 |
| plasmid pCFSAN083827_2: | 68,185 bp | CP070404 |
REBASE acronym: Eco3827
Org_num: 46537
All begin JNP95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5735 | IS3 family transposase | |||
| 5740 | R | SenSI170ORF3660P (99% identity) | AGGNNNNNRTTG | Eco3827ORF5755P |
| 5745 | S | S2.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | S.Eco3827ORF5755P |
| 5750 | AAA family ATPase | |||
| 5755 | M | M.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | M.Eco3827ORF5755P |
| 5760 | transposase domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco3827DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2440 | DUF2556 family protein | |||
| ??? | M | M.EcoQ4552ORF9480P (100% identity) | M.Eco3827ORF2445P | |
| 2450 | DNA-binding transcriptional regulator Fis | |||
| 9255 | TrmB family transcriptional regulator | |||
| 9260 | M | M.EcoFu019ORF14885P (99% identity) | M.Eco3827ORF9260P | |
| 9285 | class II holin family protein | |||
| 9475 | phosphohydrolase | |||
| 9480 | M | M.SflN107DcmP (100% identity) | CCWGG | M.Eco3827DcmP |
| 9485 | V | V.SflFF59DcmP (100% identity) | V.Eco3827DcmP | |
| 9490 | drug/metabolite exporter YedA | |||
| 14155 | IS30-like element ISApl1 family transposase | |||
| 14160 | M | M.EcoFu019ORF10110P (96% identity) | M.Eco3827ORF14160P | |
| 14165 | TrmB family transcriptional regulator | |||
| 18905 | 253 aa hypothetical protein | |||
| 18910 | R | Ecos67ORF8885P (99% identity) | Eco3827ORF18915P | |
| 18915 | M | M.Ecos67ORF8885P (66% identity) | M.Eco3827ORF18915BP | |
| 18920 | M | M.Ecos67ORF8885P (26% identity) | M.Eco3827ORF18915AP | |
| 18925 | 59 aa hypothetical protein | |||
| 20850 | HNH endonuclease | |||
| 20855 | R | EcoEA2ORF17230P (100% identity) | Eco3827ORF20855P | |
| 20860 | 100 aa hypothetical protein | |||
| plasmid pCFSAN083827_1 | ||||
| 24495 | 284 aa hypothetical protein | |||
| 24500 | M | M.YpsF1ORFDP (100% identity) | M.Eco3827ORF24500P | |
| 24505 | DNA-binding protein | |||
| 24625 | 202 aa hypothetical protein | |||
| 24630 | M | M.YpsF1ORFBP (100% identity) | M.Eco3827ORF24630P | |
| 24635 | 48 aa hypothetical protein | |||
| 25065 | 55 aa hypothetical protein | |||
| 25070 | M | M.YpsF1ORFCP (100% identity) | M.Eco3827ORF25070P | |
| 25075 | thermonuclease family protein | |||
| plasmid pCFSAN083827_2 | ||||
| 24030 | 73 aa hypothetical protein | |||
| 24035 | M | M.SflN92ORF24820P (100% identity) | M.Eco3827ORF24035P | |
| 24040 | 101 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20860 | 100 aa hypothetical protein | |||
| 20865 | R | EcoEA2ORF17215P (99% identity) | GAACC | Eco3827ORF20870P |
| 20870 | M | M.EcoEA2ORF17215P (99% identity) | GAACC | M.Eco3827ORF20870P |
| 20875 | DEAD/DEAH box helicase family protein | |||