Xanthomonas species LMG 31884 |
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Putative Xanthomonas species LMG 31884 RM systems
Ref: Pothier,F.J. unpublished
REBASE ref # 31060
| Sequence length: | GenBank #: | |
| chromosome LMG31884: | 5,359,476 bp | LR990730 |
| plasmid LMG31884_p76: | 76,708 bp | LR990731 |
REBASE acronym: Xsp31884
Org_num: 49844
All begin LMG31884_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome LMG31884 | ||||
| 13690 | 248 aa hypothetical protein | |||
| 13700 | R | Xsp31887ORF13750P (100% identity) | Xsp31884ORF13740P | |
| 13710 | S | S2.Xsp31887ORF13750P (100% identity) | S2.Xsp31884ORF13740P | |
| 13720 | 114 aa hypothetical protein | |||
| 13730 | 284 aa hypothetical protein | |||
| 13740 | M | M.Xsp31887ORF13750P (100% identity) | M.Xsp31884ORF13740P | |
| 13750 | S | S1.Xsp31887ORF13750P (100% identity) | S1.Xsp31884ORF13740P | |
| 13760 | 86 aa hypothetical protein | |||
| 32500 | 98 aa hypothetical protein | |||
| 32520 | S | S.Xsp31887ORF32430P (100% identity) | S.Xsp31884ORF32530P | |
| ??? | M | M.Xci7111ORF18480P (96% identity) | M.Xsp31884ORF32530P | |
| 32550 | 198 aa hypothetical protein | |||
| 32560 | 211 aa hypothetical protein | |||
| 32570 | R | Xsp31887ORF32430P (100% identity) | Xsp31884ORF32530P | |
| 32580 | 102 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome LMG31884 | ||||
| 6760 | Pyruvate dehydrogenase E1 component | |||
| 6770 | M | M.Xsp31887ORF6770P (100% identity) | M.Xsp31884ORF6770P | |
| 6780 | DNA mismatch repair protein MutL | |||
| 11550 | 75 aa hypothetical protein | |||
| 11570 | M | M.Xsp98C4ORF16395P (100% identity) | M.Xsp31884ORF11570P | |
| 11580 | DNA topoisomerase 3 | |||
| 21590 | 615 aa hypothetical protein | |||
| 21600 | M | M.Xsp31887ORF21590P (100% identity) | M.Xsp31884ORF21600P | |
| 21610 | DNA topoisomerase 3 | |||
| 27340 | 655 aa hypothetical protein | |||
| 27350 | M | M.Xsp31887ORF27250P (100% identity) | M.Xsp31884ORF27350P | |
| 27360 | R | Xsp31887ORF27250P (100% identity) | Xsp31884ORF27350P | |
| 27370 | 216 aa hypothetical protein | |||
| 33630 | Protein UmuC | |||
| 33640 | R | Xsp31887ORF33550P (100% identity) | Xsp31884ORF33650P | |
| 33650 | M | M.Xsp31887ORF33550P (100% identity) | M.Xsp31884ORF33650P | |
| 33660 | Modification methylase DpnIIB | |||
| 33650 | 285 aa hypothetical protein | |||
| 33660 | M | M.Xsp31887ORF33560P (100% identity) | M.Xsp31884ORF33660P | |
| 33670 | 337 aa hypothetical protein | |||
| 39850 | 241 aa hypothetical protein | |||
| 39860 | M | M.Xsp31887ORF39780P (100% identity) | M.Xsp31884ORF39860P | |
| 39870 | 337 aa hypothetical protein | |||
| plasmid LMG31884_p76 | ||||
| 46910 | Recombination-associated protein RdgC | |||
| 46040 | M | M.Xfu1609ORFEP (74% identity) | M.Xsp31884ORF46040P | |
| 46050 | Phosphoadenosine phosphosulfate reductase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome LMG31884 | ||||
| 2540 | protein | |||
| 2550 | M | M.Xsp31887ORF2540P (100% identity) | GCCAGG | M.Xsp31884ORF2550P |
| 2560 | R | Xsp31887ORF2540P (100% identity) | GCCAGG | Xsp31884ORF2550P |
| 2570 | Cis-3-alkyl-4-alkyloxetan-2-one decarboxylase | |||