Escherichia coli S1 |
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Putative Escherichia coli S1 RM systems
Ref: Sahulka,S.Q. et al. unpublished
REBASE ref # 31857
Complete sequence: 5,326,096 bp
GenBank #: CP070279
REBASE acronym: EcosS1
Org_num: 46795
All begin JS511_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16780 | adenine/cytosine-specific restriction | |||
| 16785 | R | Ecos103ORF22430P (100% identity) | CCANNNNNNNCTTC | EcosS1ORF16790P |
| 16790 | M | M.Ecos103ORF22430P (100% identity) | CCANNNNNNNCTTC | M.EcosS1ORF16790P |
| 16795 | S | S.Ecos103ORF22430P (100% identity) | CCANNNNNNNCTTC | S.EcosS1ORF16790P |
| 16800 | endoribonuclease SymE | |||
| 17105 | GTPase family protein | |||
| 17110 | M | M.EcosEC2ORF13930P (100% identity) | M.EcosS1ORF17110P | |
| 17115 | S | S.EcoP30LORF8395P (100% identity) | S.EcosS1ORF17110P | |
| 17120 | R | Eco22ORF12880P (100% identity) | EcosS1ORF17110P | |
| 17125 | 75 aa hypothetical protein | |||
| 19940 | 400 aa hypothetical protein | |||
| 19945 | M | M.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | M.EcosS1ORF19945P |
| 19950 | AAA family ATPase | |||
| 19955 | S | S.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | S.EcosS1ORF19945P |
| 19960 | DNA binding domain-containing protein | |||
| 19965 | histidinol-phosphatase | |||
| 19970 | R | Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | EcosS1ORF19945P |
| 19975 | helix-turn-helix domain-containing protein | |||
| 25130 | IS21-like element IS100 family transposase | |||
| 25135 | R | EcoCT30ORF22245P (100% identity) | TGANNNNNNCTTC | EcosS1ORF25140P |
| 25140 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcosS1ORF25140P |
| 25145 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcosS1ORF25140P |
| 25150 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2850 | serine/threonine protein phosphatase | |||
| 2855 | M | M.EcoZ1002ORF22335P (100% identity) | M.EcosS1ORF2855P | |
| 2860 | PerC family transcriptional regulator | |||
| 6405 | HD domain-containing protein | |||
| 6410 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcosS1DcmP |
| 6415 | V | V.SflSTLE3DcmP (100% identity) | V.EcosS1DcmP | |
| 6420 | drug/metabolite exporter YedA | |||
| 18900 | DNA-binding transcriptional regulator Fis | |||
| 18905 | M | M.Ecos71ORF2060P (100% identity) | ATGCAT | M.EcosS1ORF18905P |
| 18910 | DUF2556 family protein | |||
| 19410 | ribulose-phosphate 3-epimerase | |||
| 19415 | M | M.SspPIBDamP (100% identity) | GATC | M.EcosS1DamP |
| 19420 | cell division protein DamX | |||
| 24810 | 73 aa hypothetical protein | |||
| 24815 | M | M.SenST46ORF25580P (100% identity) | M.EcosS1ORF24815P | |
| 24820 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16775 | GTPase | |||
| 16780 | R | Ecos103MrrP (100% identity) | EcosS1MrrP | |
| 16785 | type I restriction-modification system | |||