Escherichia coli S2 |
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Putative Escherichia coli S2 RM systems
Ref: Sahulka,S.Q. et al. unpublished
REBASE ref # 31857
Complete sequence: 4,615,619 bp
GenBank #: CP070280
REBASE acronym: EcoS2
Org_num: 46796
All begin JS526_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15545 | adenine/cytosine-specific restriction | |||
| 15550 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | EcoS2ORF15555P |
| 15555 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoS2ORF15555P |
| 15560 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoS2ORF15555P |
| 15565 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10410 | drug/metabolite exporter YedA | |||
| 10415 | V | V.SflFF64DcmP (100% identity) | V.EcoS2DcmP | |
| 10420 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoS2DcmP |
| 10425 | phosphohydrolase | |||
| 16970 | DNA-binding transcriptional regulator Fis | |||
| 16975 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoS2ORF16975P |
| 16980 | DUF2556 family protein | |||
| 17575 | ribulose-phosphate 3-epimerase | |||
| 17580 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoS2DamP |
| 17585 | cell division protein DamX | |||
| 22340 | 101 aa hypothetical protein | |||
| 22345 | M | M.SflN92ORF24820P (100% identity) | M.EcoS2ORF22345P | |
| 22350 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9460 | isocitrate dehydrogenase | |||
| 9465 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoS2ORF9465P |
| 9470 | site-specific DNA recombinase | |||
| 15540 | GTPase | |||
| 15545 | R | SenHNK130MrrP (100% identity) | EcoS2MrrP | |
| 15550 | type I restriction-modification system | |||
| 15565 | endoribonuclease SymE | |||
| 15570 | R | SenHNK130McrBP (100% identity) | EcoS2McrBP | |
| 15575 | R | SenHNK130McrCP (100% identity) | EcoS2McrCP | |
| 15580 | 906 aa hypothetical protein | |||