Escherichia coli FDAARGOS_1296 |
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Putative Escherichia coli FDAARGOS_1296 RM systems
Ref: Sokurenko,E. et al. unpublished
REBASE ref # 31673
| Sequence length: | GenBank #: | |
| Chromosome: | 4,876,119 bp | CP070066 |
| plasmid unnamed1: | 123,092 bp | CP070067 |
REBASE acronym: Eco1296
Org_num: 46628
All begin I6K26_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20505 | adenine/cytosine-specific restriction | |||
| 20510 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco1296ORF20515P |
| 20515 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.Eco1296ORF20515P |
| 20520 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco1296ORF20515P |
| 20525 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2335 | cell division protein DamX | |||
| 2340 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1296DamP |
| 2345 | ribulose-phosphate 3-epimerase | |||
| 2935 | DUF2556 family protein | |||
| 2940 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco1296ORF2940P |
| 2945 | DNA-binding transcriptional regulator Fis | |||
| 6225 | PerC family transcriptional regulator | |||
| 6230 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco1296ORF6230P |
| 6235 | LexA family transcriptional regulator | |||
| 10190 | phosphohydrolase | |||
| 10195 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.Eco1296DcmP |
| 10200 | V | V.SflC32DcmP (74% identity) | V.Eco1296DcmP | |
| 10205 | drug/metabolite exporter YedA | |||
| 13445 | DUF1737 domain-containing protein | |||
| 13465 | M | M.SboBSORF1444P (100% identity) | A | M.Eco1296ORF13465P |
| 13470 | TrmB family transcriptional regulator | |||
| 20755 | HNH endonuclease | |||
| 20760 | R | Ecoi127aORF4076P (100% identity) | Eco1296ORF20760P | |
| 20765 | 59 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 23575 | 73 aa hypothetical protein | |||
| 23580 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco1296ORF23580P |
| 23585 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6425 | recombinase family protein | |||
| 6430 | R | EspFAAGmrSDP (100% identity) | Eco1296GmrSDP | |
| 6435 | DinI-like family protein | |||
| 20500 | GTPase | |||
| 20505 | R | EcosS1MrrP (100% identity) | Eco1296MrrP | |
| 20510 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14330 | NinE family protein | |||
| 14335 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco1296ORF14335P |
| 14340 | recombination protein NinB | |||