Escherichia coli FDAARGOS_1265 |
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Putative Escherichia coli FDAARGOS_1265 RM systems
Ref: Sokurenko,E. et al. unpublished
REBASE ref # 31673
| Sequence length: | GenBank #: | |
| Chromosome: | 5,213,760 bp | CP069583 |
| plasmid unnamed1: | 206,267 bp | CP069584 |
REBASE acronym: EcoS1265
Org_num: 46605
All begin I6J95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19130 | type IV toxin-antitoxin system AbiEi family | |||
| 19135 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS1265ORF19140P |
| 19140 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS1265ORF19140P |
| 19145 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS1265ORF19140P |
| 19150 | ash family protein | |||
| 20950 | restriction endonuclease | |||
| ??? | M | M.EcoZLWTORF20795P (100% identity) | RTACNNNNGTG | M.EcoS1265ORF20955P |
| 20960 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoS1265ORF20955P |
| 20965 | type I restriction endonuclease | |||
| 20970 | IS1 family transposase | |||
| 20975 | R | Ecou021ORF19870P (85% identity) | RTACNNNNGTG | EcoS1265ORF20955P |
| 20980 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1185 | cell division protein DamX | |||
| 1190 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS1265DamP |
| 1195 | ribulose-phosphate 3-epimerase | |||
| 1785 | DUF2556 family protein | |||
| 1790 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS1265ORF1790P |
| 1795 | DNA-binding transcriptional regulator Fis | |||
| 5535 | PerC family transcriptional regulator | |||
| 5540 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoS1265ORF5540P |
| 5545 | LexA family transcriptional regulator | |||
| 5580 | 67 aa hypothetical protein | |||
| 5585 | M | M.EcosR6ORF7985P (100% identity) | M.EcoS1265ORF5585P | |
| 5590 | phage lysis protein EssD | |||
| 5715 | 257 aa hypothetical protein | |||
| 5720 | M | M.SflSTLE1ORF5615P (100% identity) | M.EcoS1265ORF5720P | |
| 5725 | R | Sso8033ORF3755P (100% identity) | EcoS1265ORF5720P | |
| 5730 | 121 aa hypothetical protein | |||
| 9595 | phosphohydrolase | |||
| 9600 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS1265DcmP |
| 9605 | V | V.SflC32DcmP (74% identity) | V.EcoS1265DcmP | |
| 9610 | drug/metabolite exporter YedA | |||
| 10465 | antitermination protein | |||
| 10470 | M | M2.EcosS3ORF2905P (100% identity) | M.EcoS1265ORF10470P | |
| 10475 | R | R2.EcosS3ORF2905P (100% identity) | R1.EcoS1265ORF10470P | |
| 10480 | R | R1.EcosS3ORF2905P (100% identity) | R2.EcoS1265ORF10470P | |
| 10485 | TrmB family transcriptional regulator | |||
| 13405 | DUF3927 family protein | |||
| 13420 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoS1265ORF13420P |
| 13425 | TrmB family transcriptional regulator | |||
| 15660 | helix-turn-helix transcriptional regulator | |||
| 15665 | M | M.KpnYN1ORFGP (89% identity) | M.EcoS1265ORF15665P | |
| 15670 | 71 aa hypothetical protein | |||
| 21300 | McrC family protein | |||
| 21305 | R | EcosS9ORF2810P (33% identity) | GGTCTC | EcoS1265ORF21320AP |
| 21310 | IS3-like element ISEc52 family transposase | |||
| 21315 | R | Ecop4AORF21650BP (100% identity) | GGTCTC | EcoS1265ORF21320BP |
| 21320 | DNA cytosine methyltransferase | |||
| 22605 | 555 aa hypothetical protein | |||
| 22610 | R | EcosS3ORF15775P (100% identity) | EcoS1265ORF22615P | |
| 22615 | M | M.EcosS3ORF15775P (100% identity) | M.EcoS1265ORF22615P | |
| 22620 | conjugal transfer protein TraG N-terminal | |||
| plasmid unnamed1 | ||||
| 25860 | 102 aa hypothetical protein | |||
| 25865 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoS1265ORF25865P | |
| 25870 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9115 | shufflon system plasmid conjugative transfer | |||
| 9120 | R | Sensp14178ORF9290P (100% identity) | EcoS1265ORF9125P | |
| 9125 | M | M.Sensp14178ORF9290P (100% identity) | M.EcoS1265ORF9125P | |
| 9130 | integrase arm-type DNA-binding domain-containing | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21290 | glycosyltransferase family 2 protein | |||
| 21295 | R | EcosS3McrBP (100% identity) | EcoS1265McrBP | |
| 21300 | R | EcosS9McrCP (100% identity) | EcoS1265McrCP | |
| 21305 | Alw26I/Eco31I/Esp3I family type II restriction | |||