Escherichia coli FDAARGOS_1248 |
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Putative Escherichia coli FDAARGOS_1248 RM systems
Ref: Sokurenko,E. et al. unpublished
REBASE ref # 31673
| Sequence length: | GenBank #: | |
| Chromosome: | 4,919,415 bp | CP069542 |
| plasmid unnamed1: | 50,632 bp | CP069543 |
REBASE acronym: Eco1248
Org_num: 46589
All begin I6J78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20365 | DNA-binding protein | |||
| ??? | M | M.EcoHs3III (99% identity) | M.Eco1248ORF20370P | |
| 20375 | S | S.EcoHs3III (100% identity) | S.Eco1248ORF20370P | |
| 20380 | R | EcoHs3IIIP (99% identity) | Eco1248ORF20370P | |
| 20385 | lactate utilization protein C | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3725 | cell division protein DamX | |||
| 3730 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1248DamP |
| 3735 | ribulose-phosphate 3-epimerase | |||
| 4350 | DUF2556 family protein | |||
| 4355 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco1248ORF4355P |
| 4360 | DNA-binding transcriptional regulator Fis | |||
| 5885 | integrase | |||
| 5890 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.Eco1248ORF5890P |
| 5895 | R | SflFF80ORF21000P (100% identity) | YGGCCR | Eco1248ORF5890P |
| 5900 | IS3 family transposase | |||
| 11295 | HD domain-containing protein | |||
| 11300 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco1248DcmP |
| 11305 | V | V.SsoSE61DcmP (100% identity) | V.Eco1248DcmP | |
| 11310 | drug/metabolite exporter YedA | |||
| 14835 | DUF3927 family protein | |||
| 14850 | M | M.SsoL4094ORF17545P (99% identity) | A | M.Eco1248ORF14850P |
| 14855 | TrmB family transcriptional regulator | |||
| 17355 | replication endonuclease | |||
| 17360 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco1248ORF17360P |
| 17365 | TraR/DksA family transcriptional regulator | |||
| 20420 | zinc ribbon domain-containing protein | |||
| 20425 | M | M.KpnFF77ORF20840P (100% identity) | GGTACC | M.Eco1248ORF20425P |
| 20430 | tyrosine-type recombinase/integrase | |||
| 22240 | HNH endonuclease | |||
| 22245 | R | EcosB2CORFAP (100% identity) | Eco1248ORF22245P | |
| 22250 | 332 aa hypothetical protein | |||
| 22265 | BREX system P-loop protein BrxC | |||
| 22270 | RM | EcoM1D1ORF4384P (100% identity) | Eco1248ORF22270P | |
| 22275 | BREX-1 system phosphatase PglZ type A | |||
| 22685 | 174 aa hypothetical protein | |||
| 22690 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Eco1248ORF22690P |
| 22695 | ATP-binding protein | |||
| 22700 | 126 aa hypothetical protein | |||
| 22705 | R | Ecou021ORF20225P (100% identity) | Eco1248ORF22705P | |
| 22710 | 97 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 23725 | 103 aa hypothetical protein | |||
| 23730 | M | M.Sen143ORF26480P (100% identity) | M.Eco1248ORF23730P | |
| 23735 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11095 | shufflon system plasmid conjugative transfer | |||
| 11100 | R | Sensp14178ORF9290P (99% identity) | CCGAG | Eco1248ORF11105P |
| 11105 | M | M.SenUJ816AORFEP (98% identity) | CCGAG | M.Eco1248ORF11105P |
| 11110 | SpnT protein | |||