Escherichia coli FDAARGOS_1252 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli FDAARGOS_1252 RM systems
Ref: Sokurenko,E. et al. unpublished
REBASE ref # 31673
| Sequence length: | GenBank #: | |
| Chromosome: | 5,223,257 bp | CP069528 |
| plasmid unnamed1: | 50,009 bp | CP069529 |
| plasmid unnamed3: | 68,185 bp | CP069531 |
REBASE acronym: Eco1252
Org_num: 46593
All begin I6J82_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16485 | 322 aa hypothetical protein | |||
| 16490 | R | SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | Eco1252ORF16495P |
| 16495 | M | M.SspS13ORF3945P (100% identity) | AAGNNNNNNNRTDCC | M.Eco1252ORF16495P |
| 16500 | S | S.SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | S.Eco1252ORF16495P |
| 16505 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5475 | phosphohydrolase | |||
| 5480 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco1252DcmP |
| 5485 | V | V.SflC32DcmP (74% identity) | V.Eco1252DcmP | |
| 5490 | drug/metabolite exporter YedA | |||
| 6125 | antitermination protein | |||
| 6130 | M | M2.EcosS3ORF2905P (100% identity) | M.Eco1252ORF6130P | |
| 6135 | R | R2.EcosS3ORF2905P (100% identity) | R1.Eco1252ORF6130P | |
| 6140 | R | R1.EcosS3ORF2905P (100% identity) | R2.Eco1252ORF6130P | |
| 6145 | TrmB family transcriptional regulator | |||
| 6145 | TrmB family transcriptional regulator | |||
| 6150 | M | M.EcoUS12ORF13970P (100% identity) | A | M.Eco1252ORF6150P |
| 6170 | class II holin family protein | |||
| 18050 | 211 aa hypothetical protein | |||
| 18055 | R | Mmo12289ORF1444P (100% identity) | GCGCGC | Eco1252ORF18060P |
| 18060 | M | M.KquU41ORF24735P (100% identity) | GCGCGC | M.Eco1252ORF18060P |
| 18065 | V | V.EcoSCU387ORF1515P (100% identity) | V.Eco1252ORF18060P | |
| 18070 | conjugal transfer protein TraD | |||
| 19550 | 330 aa hypothetical protein | |||
| 19555 | M | M.SflFF35ORF20P (100% identity) | M.Eco1252ORF19555P | |
| 19560 | DUF3850 domain-containing protein | |||
| 22465 | cell division protein DamX | |||
| 22470 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1252DamP |
| 22475 | ribulose-phosphate 3-epimerase | |||
| 23065 | DUF2556 family protein | |||
| 23070 | M | M.SflC32ORFAP (100% identity) | ATGCAT | M.Eco1252ORF23070P |
| 23075 | DNA-binding transcriptional regulator Fis | |||
| plasmid unnamed1 | ||||
| 25280 | 73 aa hypothetical protein | |||
| 25285 | M | M.Sso3885ORF23215P (100% identity) | SAY | M.Eco1252ORF25285P |
| 25290 | 103 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 26000 | 73 aa hypothetical protein | |||
| 26005 | M | M.Ecos69ORF26765P (100% identity) | M.Eco1252ORF26005P | |
| 26010 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16505 | endoribonuclease SymE | |||
| 16510 | R | Eho218GmrDP (100% identity) | Eco1252GmrDP | |
| 16515 | 26 aa hypothetical protein | |||