Bacteroides caccae FDAARGOS_1219 |
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Putative Bacteroides caccae FDAARGOS_1219 RM systems
Ref: Carlson,P. et al. unpublished
REBASE ref # 31676
Complete sequence: 4,570,957 bp
GenBank #: CP069532
REBASE acronym: Bca1219
Org_num: 46247
All begin I6J49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2980 | helix-turn-helix domain-containing protein | |||
| 2985 | C | C.Msa17ORFW1P (100% identity) | C.Bca1219ORF3000P | |
| 2990 | R | Msa17ORFW1P (96% identity) | Bca1219ORF3000P | |
| 2995 | HNH endonuclease | |||
| 3000 | M | M.Msa17ORFW1P (100% identity) | M.Bca1219ORF3000P | |
| 3005 | S | S4.Msa17ORFW1P (98% identity) | S1.Bca1219ORF3000P | |
| 3010 | S | S3.Msa17ORFW1P (100% identity) | S2.Bca1219ORF3000P | |
| 3015 | S | S2.Msa17ORFW1P (100% identity) | S3.Bca1219ORF3000P | |
| 3020 | tyrosine-type recombinase/integrase | |||
| 3025 | S | S1.Msa17ORFW1P (100% identity) | S4.Bca1219ORF3000P | |
| 3030 | 134 aa hypothetical protein | |||
| 8300 | 504 aa hypothetical protein | |||
| 8305 | R | Msa17ORFF1P (100% identity) | Bca1219ORF8330P | |
| 8310 | S | S2.Bca1097ORF2315P (100% identity) | S2.Bca1219ORF8330P | |
| 8315 | tyrosine-type recombinase/integrase | |||
| 8320 | DNA binding domain-containing protein | |||
| 8325 | S | S2.Msa17ORFF1P (100% identity) | S1.Bca1219ORF8330P | |
| 8330 | M | M2.Msa17ORFF1P (100% identity) | M2.Bca1219ORF8330P | |
| 8335 | M | M1.Msa17ORFF1P (96% identity) | M1.Bca1219ORF8330P | |
| 8340 | C | C.Msa17ORFG1P (100% identity) | C.Bca1219ORF8330P | |
| 8345 | plasmid recombination protein | |||
| 14930 | ATP-binding protein | |||
| 14935 | M | M1.Msa17ORFWP (100% identity) | M1.Bca1219ORF14935P | |
| 14940 | M | M2.Bun901ORF13185P (100% identity) | M2.Bca1219ORF14935P | |
| 14945 | S | S2.Msa17ORFWP (100% identity) | TCCNNNNNCTG | S1.Bca1219ORF14935P |
| 14950 | tyrosine-type recombinase/integrase | |||
| 14955 | S | S2.BccORFFP (100% identity) | S2.Bca1219ORF14935P | |
| 14960 | R | Msa17ORFWP (100% identity) | Bca1219ORF14935P | |
| 14965 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1930 | site-specific integrase | |||
| 1935 | R | Msa17ORFZ1P (100% identity) | CCATC | Bca1219ORF1940P |
| 1940 | M | M2.Msa17ORFZ1P (100% identity) | CCATC | M1.Bca1219ORF1940P |
| ??? | M | M2.BcaC61ORF3636P (100% identity) | M2.Bca1219ORF1940P | |
| 1950 | carbamoyl-phosphate synthase | |||
| 6765 | DGQHR domain-containing protein | |||
| 6770 | M | M.PmeBin96ORFEP (100% identity) | M.Bca1219ORF6770P | |
| 6775 | clindamycin resistance transfer factor BtgB | |||
| 9380 | site-specific integrase | |||
| 9385 | R | Bca43185aORF3115P (100% identity) | Bca1219ORF9385P | |
| 9390 | Bro-N domain-containing protein | |||
| 9390 | Bro-N domain-containing protein | |||
| 9395 | M | M.Bca43185aORF3125P (100% identity) | M.Bca1219ORF9395P | |
| 9400 | DUF4248 domain-containing protein | |||
| 16765 | 67 aa hypothetical protein | |||
| 16770 | M | M.Msa17ORFI2P (100% identity) | M.Bca1219ORF16770P | |
| 16775 | 182 aa hypothetical protein | |||
| 16810 | NUMOD4 motif-containing HNH endonuclease | |||
| 16815 | M | M.Msa17ORFJ2P (100% identity) | M.Bca1219ORF16815P | |
| 16820 | phosphoadenosine phosphosulfate reductase family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14890 | 144 aa hypothetical protein | |||
| 14895 | R | Msa17McrBP (100% identity) | Bca1219McrBP | |
| 14900 | R | PmeBin35McrCP (100% identity) | Bca1219McrCP | |
| 14905 | 247 aa hypothetical protein | |||