Haemophilus parahaemolyticus FDAARGOS_1199 |
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Putative Haemophilus parahaemolyticus FDAARGOS_1199 RM systems
Ref: Sproer,C. et al. unpublished
REBASE ref # 31614
Complete sequence: 2,092,164 bp
GenBank #: CP069510
REBASE acronym: Hpa1199
Org_num: 47808
All begin I6J29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1255 | site-specific integrase | |||
| 1260 | R | Hpa8479ORF958P (100% identity) | Hpa1199ORF1275P | |
| 1265 | S | S2.HhaVIP (91% identity) | S2.Hpa1199ORF1275P | |
| 1270 | S | S1.HhaVI (100% identity) | ACCNNNNNGGT | S1.Hpa1199ORF1275P |
| 1275 | M | M.Hpa8479ORF958P (100% identity) | M.Hpa1199ORF1275P | |
| 1280 | acetyl-CoA carboxylase, carboxyltransferase | |||
| 2960 | relaxase/mobilization nuclease domain-containing | |||
| 2965 | R | Hpa8479ORF611P (100% identity) | Hpa1199ORF2985P | |
| 2970 | 51 aa hypothetical protein | |||
| 2975 | 449 aa hypothetical protein | |||
| 2980 | S | S.Hpa8479ORF611P (100% identity) | S.Hpa1199ORF2985P | |
| ??? | M | M.Hpa8479ORF611P (100% identity) | M.Hpa1199ORF2985P | |
| 2995 | 96 aa hypothetical protein | |||
| 3910 | CDP-diacylglycerol--glycerol-3-phosphate | |||
| 3915 | R | Hpa8479ORF419P (100% identity) | TTANNNNNNNTCG | Hpa1199ORF3930P |
| 3920 | FRG domain-containing protein | |||
| 3925 | S | S.Hpa8479ORF419P (100% identity) | TTANNNNNNNTCG | S.Hpa1199ORF3930P |
| ??? | M | M.HhaIV (98% identity) | TTANNNNNNNTCG | M.Hpa1199ORF3930P |
| 3935 | 3-phosphoserine/phosphohydroxythreonine | |||
| 8290 | DNA polymerase III subunit delta | |||
| 8295 | R | Hpa8479ORF1592P (100% identity) | Hpa1199ORF8320P | |
| 8300 | hydroxyacid dehydrogenase | |||
| 8305 | AAA family ATPase | |||
| 8310 | S | S.Hpa8479ORF1592P (100% identity) | S.Hpa1199ORF8320P | |
| 8315 | virulence RhuM family protein | |||
| 8320 | M | M.Hpa8479ORF1592P (100% identity) | M.Hpa1199ORF8320P | |
| 8325 | transcriptional regulator AsnC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 820 | hydroxyethylthiazole kinase | |||
| 825 | M | M.HhaORF9030P (100% identity) | M.Hpa1199ORF825P | |
| 830 | 57 aa hypothetical protein | |||
| 1990 | YoaH family protein | |||
| 1995 | M | M.Hpa8479ORF811P (100% identity) | M.Hpa1199ORF1995P | |
| 2000 | leucine-rich repeat domain-containing protein | |||
| 2730 | 73 aa hypothetical protein | |||
| 2735 | M | M.HhaORF750P (100% identity) | M.Hpa1199ORF2735P | |
| 2740 | replication endonuclease | |||
| 3580 | DNA polymerase I | |||
| 3585 | S | S.Hpa8479ORF486P (100% identity) | S.Hpa1199ORF3590P | |
| 3590 | RM | Hpa8479ORF486P (100% identity) | Hpa1199ORF3590P | |
| 3595 | tryptophan synthase subunit alpha | |||
| 8495 | 1,4-dihydroxy-2-naphthoyl-CoA synthase | |||
| 8500 | M | M.Hpa8479I (100% identity) | GANTC | M.Hpa1199ORF8500P |
| 8505 | R | Hpa8479IP (100% identity) | GANTC | Hpa1199ORF8500P |
| 8510 | penicillin-binding protein 1B | |||
| 9155 | arginine ABC transporter ATP-binding protein | |||
| 9160 | R | Hpa8479ORF1427P (100% identity) | GCGC | Hpa1199ORF9165P |
| 9165 | M | M.Hpa8479ORF1427P (100% identity) | GCGC | M.Hpa1199ORF9165P |
| 9170 | helix-turn-helix transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2440 | DEAD/DEAH box helicase | |||
| 2445 | R | Hpa8479ORF718P (100% identity) | Hpa1199ORF2450P | |
| 2450 | M | M.HhaORF465P (100% identity) | M.Hpa1199ORF2450P | |
| 2455 | translation initiation factor IF-2 | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 65 | AI-2E family transporter | |||
| 70 | M | M.Hpa8479ORF1208P (100% identity) | GATC | M.Hpa1199ORF70P |
| 75 | 3-dehydroquinate synthase | |||