[Clostridium] scindens FDAARGOS_1227 |
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Putative [Clostridium] scindens FDAARGOS_1227 RM systems
Ref: Carlson,P. et al. unpublished
REBASE ref # 31676
Complete sequence: 3,619,096 bp
GenBank #: CP069444
REBASE acronym: Csc1227
Org_num: 46403
All begin I6J57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2945 | 159 aa hypothetical protein | |||
| 2950 | R | CscSt60ORF6350P (100% identity) | Csc1227ORF2955P | |
| 2955 | M | M.CscSt60ORF6350P (100% identity) | M.Csc1227ORF2955P | |
| 2960 | S | S.CscSt60ORF6350P (100% identity) | S.Csc1227ORF2955P | |
| 2965 | ImmA/IrrE family metallo-endopeptidase | |||
| 6450 | helix-turn-helix domain-containing protein | |||
| 6455 | M | M.CscSt60ORF14350P (100% identity) | CNRTANNNNNNNTCNNC | M.Csc1227ORF6455P |
| 6460 | S | S.CscSt60ORF14350P (100% identity) | CNRTANNNNNNNTCNNC | S.Csc1227ORF6455P |
| 6465 | R | CscSt60ORF14350P (100% identity) | CNRTANNNNNNNTCNNC | Csc1227ORF6455P |
| 6470 | DUF45 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3475 | molybdopterin biosynthesis protein | |||
| 3480 | M | M.CscWT3DORFEP (100% identity) | M.Csc1227ORF3480P | |
| 3485 | R | CscSt60ORF7470P (100% identity) | Csc1227ORF3480P | |
| 3490 | V | V.CscWT3DORFGP (100% identity) | V.Csc1227ORF3480P | |
| 3495 | DegV family protein | |||
| 4160 | 53 aa hypothetical protein | |||
| 4165 | M | M.Csc35704ORF2062P (89% identity) | M.Csc1227ORF4165P | |
| 4170 | 104 aa hypothetical protein | |||
| 4210 | 92 aa hypothetical protein | |||
| 4215 | M | M.Csc35704ORF2072P (100% identity) | M.Csc1227ORF4215P | |
| 4220 | 116 aa hypothetical protein | |||
| 6645 | 52 aa hypothetical protein | |||
| 6650 | M | M.Csc35704ORF2574P (100% identity) | M.Csc1227ORF6650P | |
| 6655 | virulence protein | |||
| 8610 | 98 aa hypothetical protein | |||
| 8615 | M | M.Csc35704ORF2968P (100% identity) | M.Csc1227ORF8615P | |
| 8620 | 60 aa hypothetical protein | |||
| 8625 | 124 aa hypothetical protein | |||
| 8630 | M | M.Csc35704ORF2972P (100% identity) | M.Csc1227ORF8630P | |
| 8635 | 73 aa hypothetical protein | |||
| 11315 | ATP-binding protein | |||
| 11320 | M | M.Csc35704ORF3507P (100% identity) | M.Csc1227ORF11320P | |
| 11325 | CHAP domain-containing protein | |||
| 13835 | 228 aa hypothetical protein | |||
| 13840 | M | M.Csc35704ORF312P (100% identity) | M1.Csc1227ORF13840P | |
| 13845 | 52 aa hypothetical protein | |||
| 13850 | 74 aa hypothetical protein | |||
| 13855 | M | M.Csc35704ORF315P (100% identity) | M2.Csc1227ORF13840P | |
| 13860 | 60 aa hypothetical protein | |||
| 15965 | 73 aa hypothetical protein | |||
| 15970 | R | CscSt60ORF32210P (100% identity) | GGATC | Csc1227ORF15975P |
| 15975 | M | M.CscSt60ORF32210P (100% identity) | GGATC | M.Csc1227ORF15975P |
| 15980 | helix-turn-helix transcriptional regulator | |||
| 15980 | helix-turn-helix transcriptional regulator | |||
| 15985 | M | M.CscSt60ORF32230P (100% identity) | M.Csc1227ORF15985P | |
| 15990 | transposase family protein | |||
| 17680 | ATP-binding protein | |||
| 17685 | M | M.Csc35704ORF1078P (100% identity) | M.Csc1227ORF17685P | |
| 17690 | restriction endonuclease | |||
| 17685 | DNA adenine methylase | |||
| 17690 | RM | Csc35704ORF1079P (100% identity) | Csc1227ORF17690P | |
| 17695 | AAA family ATPase | |||
| 17795 | 134 aa hypothetical protein | |||
| 17800 | M | M.Csc35704ORF1100P (93% identity) | M.Csc1227ORF17800P | |
| 17805 | ATP-binding protein | |||
| 17960 | ATP-binding protein | |||
| 17965 | M | M.Sin30303ORF6845P (100% identity) | M.Csc1227ORF17965P | |
| 17970 | CHAP domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2930 | 1229 aa hypothetical protein | |||
| 2935 | R | CscSt60McrBP (100% identity) | Csc1227McrBP | |
| 2940 | R | CscSt60McrCP (100% identity) | Csc1227McrCP | |
| 2945 | 159 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8645 | 55 aa hypothetical protein | |||
| 8650 | M | M.Csc35704ORF2976P (100% identity) | M.Csc1227ORF8650P | |
| 8655 | 64 aa hypothetical protein | |||