Clostridia bacterium zrk5 |
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Putative Clostridia bacterium zrk5 RM systems
Ref: Zheng,R.K. and Sun,C.M. unpublished
REBASE ref # 29235
Complete sequence: 2,563,013 bp
GenBank #: CP069393
REBASE acronym: Cbazrk5
Org_num: 47119
All begin JR334_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 30 | helix-turn-helix transcriptional regulator | |||
| 35 | M | M.Gpu1384ORF1100P (78% identity) | M.Cbazrk5ORF35P | |
| 40 | sulfite exporter TauE/SafE family protein | |||
| 45 | MarR family transcriptional regulator | |||
| 50 | phage tail family protein | |||
| 55 | 54 aa hypothetical protein | |||
| 60 | transposase | |||
| 65 | transposase | |||
| 70 | 800 aa hypothetical protein | |||
| 75 | 98 aa hypothetical protein | |||
| 80 | R | PspY2ORFFP (87% identity) | Cbazrk5ORF35P | |
| 85 | restriction endonuclease | |||
| 850 | helix-turn-helix domain-containing protein | |||
| 855 | M | M.HspSDIDORF1569P (48% identity) | M.Cbazrk5ORF855P | |
| 860 | R | SspZZT01ORF2220P (93% identity) | Cbazrk5ORF855P | |
| 865 | DUF1837 domain-containing protein | |||
| 880 | DEAD/DEAH box helicase family protein | |||
| 885 | M | M.DspTolMORF10280P (62% identity) | M.Cbazrk5ORF885P | |
| 890 | S | S.PmeBin172ORFHP (52% identity) | S1.Cbazrk5ORF885P | |
| 895 | R | DspTolMORF10280P (87% identity) | Cbazrk5ORF885P | |
| 900 | S | S.AbuP1200III (28% identity) | S2.Cbazrk5ORF885P | |
| 905 | S | S.Efa2079ORFAP (26% identity) | S3.Cbazrk5ORF885P | |
| 910 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 760 | virulence protein | |||
| 765 | M | M.DspTolMORF10380P (96% identity) | M.Cbazrk5ORF765P | |
| 770 | methionine adenosyltransferase | |||
| 7640 | 107 aa hypothetical protein | |||
| 7645 | M | M.LmoLM30ORF2430P (64% identity) | M.Cbazrk5ORF7645P | |
| 7650 | HNH endonuclease | |||
| 7730 | bifunctional (p)ppGpp | |||
| 7735 | R | YkrI (44% identity) | Cbazrk5ORF7735P | |
| 7740 | 115 aa hypothetical protein | |||
| 7900 | HNH endonuclease | |||
| 7905 | M | M.PspQWL01ORF11075P (95% identity) | M.Cbazrk5ORF7905P | |
| 7910 | virulence protein | |||
| 12020 | 289 aa hypothetical protein | |||
| 12025 | RM | CstSORF1034P (61% identity) | Cbazrk5ORF12025P | |
| 12030 | BREX-1 system phosphatase PglZ type A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7780 | DUF2130 domain-containing protein | |||
| 7785 | R | Swo4J5ORFDP (98% identity) | Cbazrk5ORF7790P | |
| 7790 | M | M.Swo4J5ORFDP (55% identity) | M.Cbazrk5ORF7790P | |
| 7795 | 156 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6410 | (deoxy)nucleoside triphosphate | |||
| 6415 | R | NcuWH12ORF2610P (41% identity) | Cbazrk5ORF6415P | |
| 6420 | 244 aa hypothetical protein | |||