Xanthomonas oryzae pv. oryzae LN4 |
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Putative Xanthomonas oryzae pv. oryzae LN4 RM systems
Ref: Xu,Z. unpublished
REBASE ref # 26838
Complete sequence: 5,012,583 bp
GenBank #: CP045452
REBASE acronym: XorLN4
Org_num: 49842
All begin GDR29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15935 | 61 aa hypothetical protein | |||
| 15940 | R | XorSK23ORF6430P (97% identity) | XorLN4ORF15970P | |
| 15945 | 228 aa hypothetical protein | |||
| 15950 | 248 aa hypothetical protein | |||
| 15955 | S | S.XorKORF3457P (30% identity) | S2.XorLN4ORF15970P | |
| ??? | S | S.XorPX061II (7% identity) | S1.XorLN4ORF15970P | |
| 15970 | M | M.XorYcbORF17970P (76% identity) | M.XorLN4ORF15970P | |
| 15975 | restriction endonuclease | |||
| 15985 | 87 aa hypothetical protein | |||
| 15990 | R | XorLN18ORF7185P (98% identity) | XorLN4ORF16000P | |
| 15995 | Abi family protein | |||
| 16000 | M | M.XorKORF3462P (99% identity) | M.XorLN4ORF16000P | |
| ??? | S | S.XorKORF3462P (23% identity) | S1.XorLN4ORF16000P | |
| 16005 | S | S.XorKORF3462P (24% identity) | S2.XorLN4ORF16000P | |
| ??? | S | S.XorYcbORF18000P (12% identity) | S3.XorLN4ORF16000P | |
| 16010 | S | S.XorYcbORF18000P (33% identity) | S4.XorLN4ORF16000P | |
| 16015 | type II toxin-antitoxin system RelE/ParE family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 545 | plasmid mobilization relaxosome protein MobC | |||
| 550 | V | V.XorPXO61ORF3170P (100% identity) | V.XorLN4ORF555P | |
| 555 | M | M.XorPXO61ORF3170P (99% identity) | CGATCG | M.XorLN4ORF555P |
| 560 | R | XorPXO61ORF3170P (98% identity) | CGATCG | XorLN4ORF555P |
| 565 | IS1595-like element ISXo2 family transposase | |||
| 6505 | Com family DNA-binding transcriptional | |||
| 6510 | M | M.XorZ173ORF15200P (94% identity) | M.XorLN4ORF6510P | |
| 6515 | 84 aa hypothetical protein | |||
| 18700 | PDZ domain-containing protein | |||
| 18705 | R | XorZ173ORF3935P (61% identity) | CTGCAG | XorLN4ORF18710P |
| 18710 | M | M.XorZ173ORF3935P (96% identity) | CTGCAG | M.XorLN4ORF18710P |
| 18715 | lipoyl synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20090 | Fic family protein | |||
| 20095 | M | M.XorZ173ORF2630P (97% identity) | CCGAGG | M.XorLN4ORF20095P |
| 20100 | R | XorYN24ORF9770P (99% identity) | CCGAGG | XorLN4ORF20095P |
| 20105 | alpha/beta fold hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15970 | N-6 DNA methylase | |||
| 15975 | R | XorZ173MrrP (93% identity) | XorLN4MrrP | |
| 15980 | type II toxin-antitoxin system RelE/ParE family | |||