Pectobacterium parmentieri QK-5 |
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Putative Pectobacterium parmentieri QK-5 RM systems
Ref: Li,H. et al. unpublished
REBASE ref # 32213
Complete sequence: 5,047,152 bp
GenBank #: CP062254
REBASE acronym: PpaQK5
Org_num: 48602
All begin IG623_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8215 | 428 aa hypothetical protein | |||
| 8220 | S | S.PpaPB20ORF5800P (100% identity) | S.PpaQK5ORF8225P | |
| 8225 | M | M.PpaPB20ORF5800P (100% identity) | M.PpaQK5ORF8225P | |
| 8230 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2615 | integrase arm-type DNA-binding domain-containing | |||
| 2620 | R | PpaPB20DptFP (100% identity) | PpaQK5DptFP | |
| 2625 | DNA phosphorothioation-dependent restriction | |||
| 2620 | DNA phosphorothioation-dependent restriction | |||
| 2625 | R | PpaPB20DptGP (100% identity) | PpaQK5DptGP | |
| 2630 | DNA phosphorothioation-dependent restriction | |||
| 2625 | DNA phosphorothioation-dependent restriction | |||
| 2630 | R | PpaPB20DptHP (100% identity) | PpaQK5DptHP | |
| 2635 | 174 aa hypothetical protein | |||
| 2640 | DGQHR domain-containing protein | |||
| 2645 | M | M.PpaPB20DndEP (100% identity) | M.PpaQK5DndEP | |
| 2650 | DNA sulfur modification protein DndD | |||
| 2645 | DNA sulfur modification protein DndE | |||
| 2650 | M | M.PpaPB20DndDP (100% identity) | M.PpaQK5DndDP | |
| 2655 | DNA phosphorothioation system sulfurtransferase | |||
| 2650 | DNA sulfur modification protein DndD | |||
| 2655 | M | M.PpaPB20DndCP (100% identity) | M.PpaQK5DndCP | |
| 2660 | DNA sulfur modification protein DndB | |||
| 2655 | DNA phosphorothioation system sulfurtransferase | |||
| 2660 | M | M.PpaPB20DndBP (100% identity) | M.PpaQK5DndBP | |
| 2665 | transcriptional regulator | |||
| 8105 | GTPase | |||
| 8110 | M | M.Pwa1002ORFDP (100% identity) | M.PpaQK5ORF8110P | |
| 8115 | DNA topoisomerase III | |||
| 16965 | 576 aa hypothetical protein | |||
| 16970 | M | M.PpaPB20ORF14040P (100% identity) | RCCGGY | M.PpaQK5ORF16970P |
| 16975 | ATP-binding protein | |||
| 20235 | ribulose-phosphate 3-epimerase | |||
| 20240 | M | M.PwaDamP (100% identity) | GATC | M.PpaQK5DamP |
| 20245 | SPOR domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6890 | inovirus Gp2 family protein | |||
| 6895 | R | PpaPB20GmrSDP (100% identity) | PpaQK5GmrSDP | |
| 6900 | 178 aa hypothetical protein | |||