Salmonella enterica subsp. enterica serovar Typhimurium ATCC 14028 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium ATCC 14028 RM systems
Ref: An,Y.W. et al. unpublished
REBASE ref # 29171
| Sequence length: | GenBank #: | |
| Chromosome: | 4,870,224 bp | CP043907 |
| plasmid unnamed: | 93,830 bp | CP043905 |
REBASE acronym: Sens14028
Org_num: 46932
All begin F1727_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14225 | endoribonuclease SymE | |||
| 14230 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sens14028ORF14235P |
| 14235 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sens14028ORF14235P |
| 14240 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sens14028ORF14235P |
| 14245 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1195 | drug/metabolite exporter YedA | |||
| 1200 | V | V.StyUK1DcmP (100% identity) | V.Sens14028DcmP | |
| 1205 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sens14028DcmP |
| 1210 | phosphohydrolase | |||
| 1445 | RusA family crossover junction | |||
| 1450 | M | M.StyUK1V (100% identity) | GATC | M.Sens14028ORF1450P |
| 1455 | PerC family transcriptional regulator | |||
| 8465 | DNA-binding transcriptional regulator Fis | |||
| 8470 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sens14028ORF8470P |
| 8475 | DUF2556 domain-containing protein | |||
| 8955 | ribulose-phosphate 3-epimerase | |||
| 8960 | M | M.StyTDamP (100% identity) | GATC | M.Sens14028DamP |
| 8965 | cell division protein DamX | |||
| 14075 | AAA family ATPase | |||
| 14080 | RM | StyUK1IV (100% identity) | GATCAG | Sens14028ORF14080P |
| 14085 | BREX system P-loop protein BrxC | |||
| 20835 | ead/Ea22-like family protein | |||
| 20840 | M | M.Sens29958ORF6205P (100% identity) | M.Sens14028ORF20840P | |
| 20845 | DUF550 domain-containing protein | |||
| plasmid unnamed | ||||
| 500 | 73 aa hypothetical protein | |||
| 505 | M | M.StyUK1ORFAP (100% identity) | M.Sens14028ORF505P | |
| 510 | 62 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16425 | MFS transporter | |||
| 16430 | M | M.StyUK1I (100% identity) | CAGAG | M.Sens14028ORF16430P |
| 16435 | R | StyUK1IP (99% identity) | CAGAG | Sens14028ORF16430P |
| 16440 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14240 | type I restriction-modification system | |||
| 14245 | R | StyUK1MrrP (100% identity) | Sens14028MrrP | |
| 14250 | BrnT family toxin | |||