Bacteroides fragilis DK1985 |
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Putative Bacteroides fragilis DK1985 RM systems
Ref: Sydenham,T.V. and Justesen,U.S. unpublished
REBASE ref # 31697
Complete sequence: 5,380,874 bp
GenBank #: CP044428
REBASE acronym: Bfr1985
Org_num: 46249
All begin F7887_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10850 | flippase-like domain-containing protein | |||
| 10855 | R | Bfr43858ORF12130P (99% identity) | Bfr1985ORF10860P | |
| 10860 | M | M.Bfr18BORF19990P (99% identity) | M.Bfr1985ORF10860P | |
| 10865 | S | S2.BceWH2ORF1017P (39% identity) | S1.Bfr1985ORF10860P | |
| 10870 | S | S4.Pjo12C29ORF545P (40% identity) | S2.Bfr1985ORF10860P | |
| 10875 | Fic family protein | |||
| 10880 | S | S4.Bfr9343IVP (47% identity) | S3.Bfr1985ORF10860P | |
| 10885 | S | S4.Bfr1512ORF16830P (53% identity) | S4.Bfr1985ORF10860P | |
| 10890 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5220 | 285 aa hypothetical protein | |||
| 5225 | RM | Bsp2737ORF6365P (100% identity) | Bfr1985ORF5225P | |
| 5230 | 108 aa hypothetical protein | |||
| 9240 | N-6 DNA methylase | |||
| 9245 | RM | Pvu191ORF4115P (100% identity) | Bfr1985ORF9245P | |
| 9250 | ATP-dependent helicase | |||
| 13330 | conjugal transfer protein TraO | |||
| 13335 | M | M.PdiF128ORF18835P (99% identity) | M.Bfr1985ORF13335P | |
| 13340 | DUF3872 domain-containing protein | |||
| 13620 | YigZ family protein | |||
| 13625 | R | BspZJ18ORF12200P (99% identity) | Bfr1985ORF13625P | |
| 13630 | nitroreductase family protein | |||
| 15315 | 106 aa hypothetical protein | |||
| 15320 | M | M.Bfr435ORF15020P (100% identity) | M.Bfr1985ORF15320P | |
| 15325 | 139 aa hypothetical protein | |||
| 15535 | 67 aa hypothetical protein | |||
| 15540 | M | M.PmeBin12ORFDP (96% identity) | M.Bfr1985ORF15540P | |
| 15545 | 80 aa hypothetical protein | |||
| 18575 | 124 aa hypothetical protein | |||
| 18580 | M | M.Bfr17BORF19915P (99% identity) | M.Bfr1985ORF18580P | |
| 18585 | toxin Bro | |||
| 18945 | TraM recognition domain-containing protein | |||
| ??? | M | M.BxyORF24330P (78% identity) | M.Bfr1985ORF18955P | |
| 18960 | IS1182-like element ISBf3 family transposase | |||
| 21595 | BREX system P-loop protein BrxC | |||
| 21600 | RM | Bfr17BORF22385P (99% identity) | Bfr1985ORF21600P | |
| 21605 | AAA family ATPase | |||
| 23285 | integrase | |||
| 23290 | M | M.Bfa554ORF2235P (81% identity) | M.Bfr1985ORF23290P | |
| 23295 | RM | Bsa18170ORF1174P (68% identity) | Bfr1985ORF23290P | |
| 23300 | 422 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8735 | RNA pseudouridine synthase | |||
| 8740 | R | BfrQ1F2ORF3510P (100% identity) | Bfr1985ORF8745P | |
| 8745 | M | M.BfrQ1F2ORF3510P (99% identity) | M.Bfr1985ORF8745P | |
| 8750 | DUF5110 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19005 | site-specific integrase | |||
| 19010 | R | Bsp2737GmrSDP (99% identity) | Bfr1985GmrSDP | |
| 19015 | 65 aa hypothetical protein | |||