Lachnospiraceae bacterium TB5 |
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Putative Lachnospiraceae bacterium TB5 RM systems
Ref: Uek,A. and Tonouchi,A. unpublished
REBASE ref # 31067
Complete sequence: 5,089,009 bp
GenBank #: AP024169
REBASE acronym: LbaTB5
Org_num: 48057
All begin bsdtb5_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14080 | 118 aa hypothetical protein | |||
| 14090 | M | M.Pbi3152ORF6395P (74% identity) | M.LbaTB5ORF14090P | |
| 14100 | S | S.Cspbc3ORF12395P (41% identity) | S.LbaTB5ORF14090P | |
| 14110 | 351 aa hypothetical protein | |||
| 31490 | 335 aa hypothetical protein | |||
| 31500 | S | S.Csp502ORF2621P (43% identity) | S2.LbaTB5ORF31550P | |
| 31510 | 158 aa hypothetical protein | |||
| 31520 | 154 aa hypothetical protein | |||
| 31530 | phage integrase | |||
| 31540 | S | S.Alo6540ORF13229P (39% identity) | S1.LbaTB5ORF31550P | |
| 31550 | M | M.Fme5667ORF1735P (78% identity) | M.LbaTB5ORF31550P | |
| 31560 | R | Cco13027IP (77% identity) | LbaTB5ORF31550P | |
| 31570 | 159 aa hypothetical protein | |||
| 39170 | helicase | |||
| 39180 | S | S.Oba1ORF10420P (38% identity) | S.LbaTB5ORF39190P | |
| ??? | M | M.CinSt51ORF14330P (74% identity) | M.LbaTB5ORF39190P | |
| 39200 | R | Oba1ORF10420P (85% identity) | LbaTB5ORF39190P | |
| 39210 | transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 29830 | 721 aa hypothetical protein | |||
| 29840 | M | M.Ece6ORF1868P (59% identity) | M.LbaTB5ORF29840P | |
| 29850 | homoserine O-succinyltransferase | |||
| 42820 | transaldolase | |||
| 42830 | M | M.Csc25775ORFCP (54% identity) | M.LbaTB5ORF42830P | |
| 42840 | RM | RspFMBCY1ORF8840P (42% identity) | LbaTB5ORF42830P | |
| 42850 | sulfatase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5070 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate | |||
| 5080 | R | Ddi21439MrrP (64% identity) | LbaTB5MrrP | |
| 5090 | 272 aa hypothetical protein | |||
| 11750 | 109 aa hypothetical protein | |||
| 11760 | R | PmeBin171ORFDP (48% identity) | LbaTB5ORF11760P | |
| 11770 | 212 aa hypothetical protein | |||