Shinella species PSBB067 |
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Putative Shinella species PSBB067 RM systems
Ref: Barney,B. and Calixto Mancipe,N. unpublished
REBASE ref # 31701
| Sequence length: | GenBank #: | |
| plasmid unnamed1: | 4,605,385 bp | CP069303 |
| plasmid unnamed3: | 108,567 bp | CP069305 |
REBASE acronym: Ssp067
Org_num: 49169
All begin JQ506_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed1 | ||||
| 5580 | 71 aa hypothetical protein | |||
| 5585 | M | M.PcoRK1ORF2595P (77% identity) | M.Ssp067ORF5585P | |
| 5590 | site-specific DNA-methyltransferase | |||
| 5585 | DNA cytosine methyltransferase | |||
| 5590 | M | M2.PspS343ORF5895P (96% identity) | M.Ssp067ORF5590P | |
| 5595 | helix-turn-helix domain-containing protein | |||
| 5700 | AIPR family protein | |||
| 5705 | M | M1.PdeDYTN1ORF11245P (83% identity) | M.Ssp067ORF5705P | |
| 5710 | V | V.Rsp27ORFEP (64% identity) | V.Ssp067ORF5705P | |
| 5715 | type II toxin-antitoxin system RelE/ParE family | |||
| 5770 | NERD domain-containing protein | |||
| 5775 | M | M.Rsp43702ORF12870P (87% identity) | M.Ssp067ORF5775P | |
| 5780 | V | V.Rsp43702ORF12870P (87% identity) | V.Ssp067ORF5775P | |
| 5785 | DUF2793 domain-containing protein | |||
| 5920 | 76 aa hypothetical protein | |||
| 5925 | M | M2.Szo19623ORF16935P (88% identity) | M.Ssp067ORF5925P | |
| 5930 | helix-turn-helix domain-containing protein | |||
| 17105 | 294 aa hypothetical protein | |||
| 17110 | M | M.Msp1M11ORFBP (69% identity) | M.Ssp067ORF17110P | |
| 17115 | 146 aa hypothetical protein | |||
| 17460 | 83 aa hypothetical protein | |||
| 17465 | M | M.SzoXJ20ORFFP (85% identity) | M.Ssp067ORF17465P | |
| 17470 | AAA family ATPase | |||
| plasmid unnamed3 | ||||
| 26810 | 210 aa hypothetical protein | |||
| 26815 | M | M.Rda13094ORFHP (100% identity) | M.Ssp067ORF26815P | |
| 26820 | R | BstLA20WORFDP (37% identity) | Ssp067ORF26815P | |
| 26825 | V | V.Rda13094ORFHP (97% identity) | V.Ssp067ORF26815P | |
| 26830 | 161 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed1 | ||||
| 5740 | WYL domain-containing protein | |||
| 5745 | M | M.AbaWS11ORF15830P (94% identity) | M.Ssp067ORF5745P | |
| 5750 | R | AbaWS11ORF15830P (95% identity) | Ssp067ORF5745P | |
| 5755 | UvrD-helicase domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed1 | ||||
| 4185 | HAD family hydrolase | |||
| 4190 | M | M.SzoTeo12ORF38250P (98% identity) | M.Ssp067ORF4190P | |
| 4195 | HAD family phosphatase | |||