Escherichia coli O157:H7 FLT_2001A |
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Putative Escherichia coli O157:H7 FLT_2001A RM systems
Ref: Bono,J.L. and Weinroth,M.D. unpublished
REBASE ref # 31843
| Sequence length: | GenBank #: | |
| Chromosome: | 5,455,297 bp | CP051821 |
| plasmid pFLT_2001A-1: | 93,175 bp | CP051823 |
REBASE acronym: Eco2001A
Org_num: 46679
All begin HH257_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23855 | DUF262 domain-containing protein | |||
| 23860 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2001AORF23865P |
| 23865 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2001AORF23865P |
| 23870 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2001AORF23865P |
| 23875 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2270 | cell division protein DamX | |||
| 2275 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2001ADamP |
| 2280 | ribulose-phosphate 3-epimerase | |||
| 2785 | DUF2556 family protein | |||
| 2790 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2001AORF2790P |
| 2795 | DNA-binding transcriptional regulator Fis | |||
| 9655 | recombination protein NinB | |||
| 9660 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco2001AORF9660P |
| 9665 | NinE family protein | |||
| 10470 | phosphohydrolase | |||
| 10475 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2001ADcmP |
| 10480 | V | V.EcosPA8DcmP (100% identity) | V.Eco2001ADcmP | |
| 10485 | drug/metabolite exporter YedA | |||
| 14795 | DUF1737 domain-containing protein | |||
| 14810 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2001AORF14810P | |
| 14815 | TrmB family transcriptional regulator | |||
| 21875 | LexA family transcriptional regulator | |||
| 21880 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco2001AORF21880P |
| 21885 | PerC family transcriptional regulator | |||
| 24090 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2001AORF24090P |
| 24095 | DEAD/DEAH box helicase | |||
| 24130 | N-acetylneuraminate epimerase | |||
| 24135 | R | Ecos1613ORF26795P (100% identity) | Eco2001AORF24135P | |
| 24140 | transposase | |||
| 24195 | Polarity suppression protein | |||
| 24200 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco2001AORF24200P |
| 24205 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco2001AORF24200P |
| 24210 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco2001AORF24200P |
| 24215 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pFLT_2001A-1 | ||||
| 27375 | 101 aa hypothetical protein | |||
| 27380 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2001AORF27380P | |
| 27385 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23875 | endoribonuclease SymE | |||
| 23880 | R | EcosPA8GmrSDP (55% identity) | Eco2001AGmrDP | |
| 23885 | R | Ecos1613GmrSP (100% identity) | Eco2001AGmrSP | |
| 23890 | DUF1127 domain-containing protein | |||