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Putative Escherichia coli O157:H7 FLT_2004G RM systems
Ref: Bono,J.L. and Weinroth,M.D. unpublished
REBASE ref # 31843
Sequence length: | GenBank #: | |
Chromosome: | 5,455,325 bp | CP051816 |
plasmid pFLT_2004G-1: | 93,177 bp | CP051818 |
REBASE acronym: Eco2004G
Org_num: 46681
All begin HH255_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
23855 | DUF262 domain-containing protein | |||
23860 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2004GORF23865P |
23865 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2004GORF23865P |
23870 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2004GORF23865P |
23875 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2270 | cell division protein DamX | |||
2275 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2004GDamP |
2280 | ribulose-phosphate 3-epimerase | |||
2785 | DUF2556 family protein | |||
2790 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2004GORF2790P |
2795 | DNA-binding transcriptional regulator Fis | |||
9660 | recombination protein NinB | |||
9665 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco2004GORF9665P |
9670 | NinE family protein | |||
10475 | phosphohydrolase | |||
10480 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2004GDcmP |
10485 | V | V.EcosPA8DcmP (100% identity) | V.Eco2004GDcmP | |
10490 | drug/metabolite exporter YedA | |||
14800 | DUF1737 domain-containing protein | |||
14815 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2004GORF14815P | |
14820 | TrmB family transcriptional regulator | |||
21875 | LexA family transcriptional regulator | |||
21880 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco2004GORF21880P |
21885 | PerC family transcriptional regulator | |||
24090 | RM | EcosPA8ORF17390P (99% identity) | GAAABCC | Eco2004GORF24090P |
24095 | DEAD/DEAH box helicase | |||
24130 | N-acetylneuraminate epimerase | |||
24135 | R | Ecos1613ORF26795P (100% identity) | Eco2004GORF24135P | |
24140 | transposase | |||
24195 | Polarity suppression protein | |||
24200 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco2004GORF24200P |
24205 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco2004GORF24200P |
24210 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco2004GORF24200P |
24215 | integrase arm-type DNA-binding domain-containing | |||
plasmid pFLT_2004G-1 | ||||
27380 | 101 aa hypothetical protein | |||
27385 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2004GORF27385P | |
27390 | 73 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
23875 | endoribonuclease SymE | |||
23880 | R | EcosPA8GmrSDP (55% identity) | Eco2004GGmrDP | |
23885 | R | Ecos1613GmrSP (100% identity) | Eco2004GGmrSP | |
23890 | DUF1127 domain-containing protein |