Escherichia coli O157:H7 FLT_2006A |
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Putative Escherichia coli O157:H7 FLT_2006A RM systems
Ref: Bono,J.L. and Weinroth,M.D. unpublished
REBASE ref # 31843
| Sequence length: | GenBank #: | |
| Chromosome: | 5,396,494 bp | CP051811 |
| plasmid pFLT_2006A-1: | 93,183 bp | CP051813 |
REBASE acronym: Eco2006A
Org_num: 46683
All begin HH253_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23425 | DUF262 domain-containing protein | |||
| 23430 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2006AORF23435P |
| 23435 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2006AORF23435P |
| 23440 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2006AORF23435P |
| 23445 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2270 | cell division protein DamX | |||
| 2275 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2006ADamP |
| 2280 | ribulose-phosphate 3-epimerase | |||
| 2785 | DUF2556 family protein | |||
| 2790 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2006AORF2790P |
| 2795 | DNA-binding transcriptional regulator Fis | |||
| 10055 | phosphohydrolase | |||
| 10060 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2006ADcmP |
| 10065 | V | V.EcosPA8DcmP (100% identity) | V.Eco2006ADcmP | |
| 10070 | drug/metabolite exporter YedA | |||
| 14355 | DUF1737 domain-containing protein | |||
| 14370 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2006AORF14370P | |
| 14375 | TrmB family transcriptional regulator | |||
| 21445 | LexA family transcriptional regulator | |||
| 21450 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco2006AORF21450P |
| 21455 | PerC family transcriptional regulator | |||
| 23660 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2006AORF23660P |
| 23665 | DEAD/DEAH box helicase | |||
| 23700 | N-acetylneuraminate epimerase | |||
| 23705 | R | Ecos1613ORF26795P (100% identity) | Eco2006AORF23705P | |
| 23710 | transposase | |||
| 23765 | Polarity suppression protein | |||
| 23770 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco2006AORF23770P |
| 23775 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco2006AORF23770P |
| 23780 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco2006AORF23770P |
| 23785 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pFLT_2006A-1 | ||||
| 26945 | 101 aa hypothetical protein | |||
| 26950 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2006AORF26950P | |
| 26955 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23445 | endoribonuclease SymE | |||
| 23450 | R | EcosPA8GmrSDP (55% identity) | Eco2006AGmrDP | |
| 23455 | R | Ecos1613GmrSP (100% identity) | Eco2006AGmrSP | |
| 23460 | DUF1127 domain-containing protein | |||