Escherichia coli O157:H7 FLT_2006I |
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Putative Escherichia coli O157:H7 FLT_2006I RM systems
Ref: Bono,J.L. and Weinroth,M.D. unpublished
REBASE ref # 31843
| Sequence length: | GenBank #: | |
| Chromosome: | 5,453,895 bp | CP051808 |
| plasmid pFLT_2006I-1: | 93,177 bp | CP051810 |
REBASE acronym: Eco2006I
Org_num: 46684
All begin HH252_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23850 | DUF262 domain-containing protein | |||
| 23855 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2006IORF23860P |
| 23860 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2006IORF23860P |
| 23865 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2006IORF23860P |
| 23870 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2270 | cell division protein DamX | |||
| 2275 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2006IDamP |
| 2280 | ribulose-phosphate 3-epimerase | |||
| 2785 | DUF2556 family protein | |||
| 2790 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2006IORF2790P |
| 2795 | DNA-binding transcriptional regulator Fis | |||
| 9660 | recombination protein NinB | |||
| 9665 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco2006IORF9665P |
| 9670 | NinE family protein | |||
| 10475 | phosphohydrolase | |||
| 10480 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2006IDcmP |
| 10485 | V | V.EcosPA8DcmP (100% identity) | V.Eco2006IDcmP | |
| 10490 | drug/metabolite exporter YedA | |||
| 14780 | DUF1737 domain-containing protein | |||
| 14795 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2006IORF14795P | |
| 14800 | TrmB family transcriptional regulator | |||
| 21870 | LexA family transcriptional regulator | |||
| 21875 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco2006IORF21875P |
| 21880 | PerC family transcriptional regulator | |||
| 24085 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2006IORF24085P |
| 24090 | DEAD/DEAH box helicase | |||
| 24125 | N-acetylneuraminate epimerase | |||
| 24130 | R | Ecos1613ORF26795P (100% identity) | Eco2006IORF24130P | |
| 24135 | transposase | |||
| 24190 | Polarity suppression protein | |||
| 24195 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco2006IORF24195P |
| 24200 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco2006IORF24195P |
| 24205 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco2006IORF24195P |
| 24210 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pFLT_2006I-1 | ||||
| 27370 | 101 aa hypothetical protein | |||
| 27375 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2006IORF27375P | |
| 27380 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23870 | endoribonuclease SymE | |||
| 23875 | R | EcosPA8GmrSDP (55% identity) | Eco2006IGmrDP | |
| 23880 | R | Ecos1613GmrSP (100% identity) | Eco2006IGmrSP | |
| 23885 | DUF1127 domain-containing protein | |||