Escherichia coli O157:H7 FLT_2012I |
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Putative Escherichia coli O157:H7 FLT_2012I RM systems
Ref: Bono,J.L. and Weinroth,M.D. unpublished
REBASE ref # 31843
| Sequence length: | GenBank #: | |
| Chromosome: | 5,523,908 bp | CP051786 |
| plasmid pFLT_2012I-1: | 95,639 bp | CP051789 |
REBASE acronym: Eco2012I
Org_num: 46695
All begin HH242_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24240 | DUF262 domain-containing protein | |||
| 24245 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2012IORF24250P |
| 24250 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2012IORF24250P |
| 24255 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2012IORF24250P |
| 24260 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2265 | cell division protein DamX | |||
| 2270 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2012IDamP |
| 2275 | ribulose-phosphate 3-epimerase | |||
| 2780 | DUF2556 family protein | |||
| 2785 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2012IORF2785P |
| 2790 | DNA-binding transcriptional regulator Fis | |||
| 7610 | recombination protein NinB | |||
| 7615 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco2012IORF7615P |
| 7620 | NinE family protein | |||
| 10060 | recombination protein NinB | |||
| 10065 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco2012IORF10065P |
| 10070 | NinE family protein | |||
| 10880 | phosphohydrolase | |||
| 10885 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2012IDcmP |
| 10890 | V | V.EcosPA8DcmP (100% identity) | V.Eco2012IDcmP | |
| 10895 | drug/metabolite exporter YedA | |||
| 13510 | TrmB family transcriptional regulator | |||
| 13515 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco2012IORF13515P | |
| 13520 | DUF1737 domain-containing protein | |||
| 15490 | DUF1737 domain-containing protein | |||
| 15505 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2012IORF15505P | |
| 15510 | TrmB family transcriptional regulator | |||
| 22555 | LexA family transcriptional regulator | |||
| 22560 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco2012IORF22560P |
| 22565 | PerC family transcriptional regulator | |||
| 24490 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2012IORF24490P |
| 24495 | DEAD/DEAH box helicase | |||
| 24530 | N-acetylneuraminate epimerase | |||
| 24535 | R | Ecos1613ORF26795P (100% identity) | Eco2012IORF24535P | |
| 24540 | transposase | |||
| 24595 | Polarity suppression protein | |||
| 24600 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco2012IORF24600P |
| 24605 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco2012IORF24600P |
| 24610 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco2012IORF24600P |
| 24615 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pFLT_2012I-1 | ||||
| 27975 | 101 aa hypothetical protein | |||
| 27980 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2012IORF27980P | |
| 27985 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24260 | endoribonuclease SymE | |||
| 24265 | R | EcosPA8GmrSDP (55% identity) | Eco2012IGmrDP | |
| 24270 | R | Ecos1613GmrSP (100% identity) | Eco2012IGmrSP | |
| 24275 | DUF1127 domain-containing protein | |||