Escherichia coli O157:H7 FLT_2019B |
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Putative Escherichia coli O157:H7 FLT_2019B RM systems
Ref: Bono,J.L. and Weinroth,M.D. unpublished
REBASE ref # 31843
| Sequence length: | GenBank #: | |
| Chromosome: | 5,561,451 bp | CP051778 |
| plasmid pFLT_2019B-1: | 98,079 bp | CP051781 |
REBASE acronym: Eco2019B
Org_num: 46697
All begin HH240_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3175 | endoribonuclease SymE | |||
| 3180 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2019BORF3185P |
| 3185 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2019BORF3185P |
| 3190 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2019BORF3185P |
| 3195 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1650 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco2019BORF1655P | |
| 1660 | Eae protein | |||
| 2835 | integrase arm-type DNA-binding domain-containing | |||
| 2840 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco2019BORF2850P |
| 2845 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco2019BORF2850P |
| 2850 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco2019BORF2850P |
| 2855 | Polarity suppression protein | |||
| 2910 | transposase | |||
| 2915 | R | Ecos1613ORF26795P (100% identity) | Eco2019BORF2915P | |
| 2920 | N-acetylneuraminate epimerase | |||
| 2955 | DEAD/DEAH box helicase | |||
| 2960 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2019BORF2960P |
| 4870 | PerC family transcriptional regulator | |||
| 4875 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco2019BORF4875P |
| 4880 | LexA family transcriptional regulator | |||
| 12245 | TrmB family transcriptional regulator | |||
| 12250 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2019BORF12250P | |
| 12265 | DUF1737 domain-containing protein | |||
| 12630 | TrmB family transcriptional regulator | |||
| 12635 | M | M.EcoZ1836ORF13250P (100% identity) | M.Eco2019BORF12635P | |
| 12640 | DUF1737 domain-containing protein | |||
| 16865 | drug/metabolite exporter YedA | |||
| 16870 | V | V.EcosPA8DcmP (100% identity) | V.Eco2019BDcmP | |
| 16875 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2019BDcmP |
| 16880 | phosphohydrolase | |||
| 17690 | NinE family protein | |||
| 17695 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco2019BORF17695P |
| 17700 | recombination protein NinB | |||
| 20135 | NinE family protein | |||
| 20140 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco2019BORF20140P |
| 20145 | recombination protein NinB | |||
| 24950 | DNA-binding transcriptional regulator Fis | |||
| 24955 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2019BORF24955P |
| 24960 | DUF2556 family protein | |||
| 25470 | ribulose-phosphate 3-epimerase | |||
| 25475 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2019BDamP |
| 25480 | cell division protein DamX | |||
| plasmid pFLT_2019B-1 | ||||
| 28165 | 73 aa hypothetical protein | |||
| 28170 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2019BORF28170P | |
| 28175 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3160 | DUF1127 domain-containing protein | |||
| 3165 | R | Ecos1613GmrSP (100% identity) | Eco2019BGmrSP | |
| 3170 | R | EcosPA8GmrSDP (55% identity) | Eco2019BGmrDP | |
| 3175 | endoribonuclease SymE | |||