Escherichia coli O157:H7 FLT_2010G |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O157:H7 FLT_2010G RM systems
Ref: Bono,J.L. and Weinroth,M.D. unpublished
REBASE ref # 31843
| Sequence length: | GenBank #: | |
| Chromosome: | 5,482,662 bp | CP051776 |
| plasmid pFLT_2010G-1: | 94,607 bp | CP051777 |
REBASE acronym: Eco2010G
Org_num: 46691
All begin HH238_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3140 | endoribonuclease SymE | |||
| 3145 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2010GORF3150P |
| 3150 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco2010GORF3150P |
| 3155 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2010GORF3150P |
| 3160 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1650 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco2010GORF1655P | |
| 1660 | Eae protein | |||
| 2880 | transposase | |||
| 2885 | R | EcosPA8ORF17350P (100% identity) | Eco2010GORF2885P | |
| 2890 | N-acetylneuraminate epimerase | |||
| 2920 | DEAD/DEAH box helicase | |||
| 2925 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2010GORF2925P |
| 11785 | TrmB family transcriptional regulator | |||
| 11790 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco2010GORF11790P | |
| 11805 | DUF1737 domain-containing protein | |||
| 16080 | drug/metabolite exporter YedA | |||
| 16085 | V | V.EcosPA8DcmP (100% identity) | V.Eco2010GDcmP | |
| 16090 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2010GDcmP |
| 16095 | phosphohydrolase | |||
| 16890 | NinE family protein | |||
| 16895 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco2010GORF16895P |
| 16900 | recombination protein NinB | |||
| 19615 | NinE family protein | |||
| 19620 | M | M.EcoTWORF3263P (100% identity) | GATC | M.Eco2010GORF19620P |
| 19625 | endonuclease | |||
| 19795 | 55 aa hypothetical protein | |||
| 19800 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco2010GORF19800P |
| 19805 | DUF1382 family protein | |||
| 24465 | DNA-binding transcriptional regulator Fis | |||
| 24470 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2010GORF24470P |
| 24475 | DUF2556 family protein | |||
| 24990 | ribulose-phosphate 3-epimerase | |||
| 24995 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2010GDamP |
| 25000 | cell division protein DamX | |||
| plasmid pFLT_2010G-1 | ||||
| 27550 | 101 aa hypothetical protein | |||
| 27555 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2010GORF27555P | |
| 27560 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3125 | DUF1127 domain-containing protein | |||
| 3130 | R | Ecos1613GmrSP (100% identity) | Eco2010GGmrSP | |
| 3135 | R | EcosPA8GmrSDP (55% identity) | Eco2010GGmrDP | |
| 3140 | endoribonuclease SymE | |||