Citrobacter species R56 |
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Putative Citrobacter species R56 RM systems
Ref: Cao,G. and Zhong,C. unpublished
REBASE ref # 29140
Complete sequence: 4,652,769 bp
GenBank #: CP069159
REBASE acronym: CspR56
Org_num: 47116
All begin JM656_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5310 | IS1 family transposase | |||
| 5315 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | CspR56ORF5325P |
| 5320 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.CspR56ORF5325P |
| ??? | M | M.EcoVL02ORF7370P (100% identity) | ACAYNNNNCTG | M.CspR56ORF5325P |
| 5330 | transposase | |||
| 19005 | McrC family protein | |||
| 19010 | R | Hal384ORF18290P (98% identity) | CspR56ORF19020P | |
| 19015 | S | S.Hal9ORF18825P (55% identity) | S.CspR56ORF19020P | |
| ??? | M | M.LamJUb66ORF13945P (97% identity) | M.CspR56ORF19020P | |
| 19025 | 833 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1440 | cell division protein DamX | |||
| 1445 | M | M.CspS171DamP (95% identity) | M.CspR56DamP | |
| 1450 | ribulose-phosphate 3-epimerase | |||
| 1980 | DUF2556 family protein | |||
| 1985 | M | M.CspS171ORF2090P (97% identity) | M.CspR56ORF1985P | |
| 1990 | DNA-binding transcriptional regulator Fis | |||
| 8735 | DNA cytosine methyltransferase | |||
| 8740 | V | V.CspS171DcmP (92% identity) | V.CspR56DcmP | |
| 8745 | drug/metabolite exporter YedA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18995 | AlpA family phage regulatory protein | |||
| 19000 | R | SmaE05McrBP (90% identity) | CspR56McrBP | |
| 19005 | R | Rpl9528McrCP (91% identity) | CspR56McrCP | |
| 19010 | type I restriction endonuclease subunit R | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8730 | phosphohydrolase | |||
| 8735 | M | M.CspS171ORF9340P (97% identity) | M.CspR56ORF8735P | |
| 8740 | very short patch repair endonuclease | |||